Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01223 ATGTATAGCGTGGGTTCATCTTCAGAATCTCACACTCATCAGCACCCTCATCTTCCCCCAGGGTTTCGGTTCCACCCCACAGATGAGGAACTAGTGGTTCACTACCTCAAGAGAAAAACAGACTCTGTTCCTCTTCCTGTTGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCGTGGGAACTCCCAAGTAAAGCCACGTTTGGTGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGATAGGAAATACCCAAATGGGGCAAGGCCTAACCGGGCTGCTTCTTCTGGGTATTGGAAAGCTACCGGAACTGACAGGCCCATTCTTGCATCTCATGGCCACCACAAAGTTGGAGTCAAGAAAGCACTTGTTTTCTATGGTGGAAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCACGAGTACAGACTTGTTGGCAGTTCCTCAAATTCTACCTCGAAACCACCTTCTCTGCCTGCAGATCATGCACGTAGTAGCAAGAAAAACTCCTTGAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAATAACAGTACCATCATGCCAAGGTTTCCTTTGATGGAGCAGAATAAGGAGCTTTCTACGGAGAGTACTATGCTACCAGTGATGTCAACTTTGTCAGTGGCCAATAATAACAGCACTCAGAATTCTAAAGCCGCGTCTTCGAGAAGCGCAAGTTATGGACCCCTGGGACTAGAAAATGATGATAACTTATTTGATGGAATCTTAGGAGTTGACCATAGCATGCACCAAGATGTTTCTGATTCCCACCAAGTCTCTTCAAAGGGAATCTACCCTGTGAAACGAGCACTCTCGTCACAGTTTTGGAATGACACAGGGTCATCTTCTTCTAGCAGGAGATTCCATTGTGATCTCAATGCAGGAAGCAACACTGTTGAGGAAGACAATTCCTTCGTTTCACTGCTAAGCCACCTTCCACAGAACACAGCGTTTCACCCAAATGCACTTCTCGGCCCAGTTGGTAATGATGCATTGAGGCAACAGTTTCAACTTCCAAGCATGAACTGGAATGTTTAG 1068 0.4607 MYSVGSSSESHTHQHPHLPPGFRFHPTDEELVVHYLKRKTDSVPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAASSGYWKATGTDRPILASHGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVGSSSNSTSKPPSLPADHARSSKKNSLRLDDWVLCRIYKKNNSTIMPRFPLMEQNKELSTESTMLPVMSTLSVANNNSTQNSKAASSRSASYGPLGLENDDNLFDGILGVDHSMHQDVSDSHQVSSKGIYPVKRALSSQFWNDTGSSSSSRRFHCDLNAGSNTVEEDNSFVSLLSHLPQNTAFHPNALLGPVGNDALRQQFQLPSMNWNV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01223 355 MobiDBLite consensus disorder prediction 148 167 - -
Lapu6g01223 355 SUPERFAMILY NAC domain 9 185 IPR036093 GO:0003677|GO:0006355
Lapu6g01223 355 ProSiteProfiles NAC domain profile. 18 185 IPR003441 GO:0003677|GO:0006355
Lapu6g01223 355 MobiDBLite consensus disorder prediction 1 22 - -
Lapu6g01223 355 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Lapu6g01223 355 FunFam NAC transcription factor 56 27 190 - -
Lapu6g01223 355 PANTHER NAC TRANSCRIPTION FACTOR 56 18 219 - -
Lapu6g01223 355 Gene3D NAC domain 27 190 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01223 Lapu-Chr6 12077571 12079650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01223 15 354 NAC Transcription Factor Family AT1G61110 53.757 2.51e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu6g01223 NAM 3.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01223 - - gmx:100806369 591.652