Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01221 ATGGAAAATATTATCTACACTTTGGTCTTTATACTTATTCTATCTTTGAAGGCTTCTACTGTTTGTTCTAGAGAGAGGCAATGGAGTGGTGTGGGGAGAATGAGGTCTGGGGATAATAATATTGCTCATCTTGTCACTAACTTGCCTGGCCAACCTTCTGTAGATTTCCAGCACTACGCTGGCTATGTCACAGTCAATGAAACCAATGGAAGAGCACTTTTTTACTGGTTCTACGAAGCCATCACCAAGCCTGAAGACAAACCATTGGTTCTGTGGCTTAATGGAGGCCCTGGGTGCTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGACCATTTTTAGTTGACACCGATGGCAAGAGCCTTATATTTAATAACTTCTCATGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGGGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACAATTGGGAGATGACTTCACAGCTAGTGATGCTTACACTTTTCTGCAAAATTGGTTTCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCTGGAGAAAGCTATGCAGGAAAATATGTACCGGAGCTGGCTGAACTCATCCAAGACAGAAACAAGGACTCTTCCCTTCACATTGATCTCAAGGGAATTTTGCTGGGGAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACATACAAAACCATCAAAGCAAGCTGTGACTTCAATAGCAGCGACCCGTGGAGCAATAAAGATTGTAGTGAAGGAGTGGATGAAGTACTCAAACAATACAATGAAATTGATATCTACAGCCTCTACACCTCGGTATGCTTCGCCAGCACAGCACGTTCAAACGATCAATCCATGCAAATGGTGATGGTTCGCTCATCTAAAATGATGCCACGAATAATGGGTGGTTATGACCCATGTTTGGATGACTATGCTAAAACTTTTTACAATAAACCAGATGTTCAGAAGGCACTCCATGCCAGTGATGGTCACAATCTGAGGAATTGGAGTATTTGCAATGACAACATATTTAAGCACTGGAAACAATCAAAAACTTCTGTTATCCCAATCTACAAGAAGCTGATTTCAGCAGGACTTAGGATTTGGATTTACAGTGGAGACACTGATGGTAGGGTGCCAGTGCTGTCCACAAGATACAGCTTGCGTATTCTAGATTTACCTATCACTAAGAAATGGAGGCCATGGTACCATGAAAAGGAGGTAAGTGGGTGGTATCAGGAATACGAGGGGCTAACCTTTGCGACATTTCGGGGAGCTGGCCATGCAGTGCCCTGTTTCAAACCAAGCAACTCACTCGCATTCTTCTCCTCCTTTCTTCATGAACATTCACCACCCTCTATTAAATAA 1434 0.4268 MENIIYTLVFILILSLKASTVCSRERQWSGVGRMRSGDNNIAHLVTNLPGQPSVDFQHYAGYVTVNETNGRALFYWFYEAITKPEDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKSLIFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTASDAYTFLQNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIQDRNKDSSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCDFNSSDPWSNKDCSEGVDEVLKQYNEIDIYSLYTSVCFASTARSNDQSMQMVMVRSSKMMPRIMGGYDPCLDDYAKTFYNKPDVQKALHASDGHNLRNWSICNDNIFKHWKQSKTSVIPIYKKLISAGLRIWIYSGDTDGRVPVLSTRYSLRILDLPITKKWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLHEHSPPSIK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01221 477 Gene3D - 329 367 - -
Lapu6g01221 477 FunFam Carboxypeptidase 326 472 - -
Lapu6g01221 477 FunFam Carboxypeptidase 39 298 - -
Lapu6g01221 477 Pfam Serine carboxypeptidase 50 469 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 Gene3D - 376 469 - -
Lapu6g01221 477 Gene3D alpha/beta hydrolase 40 298 IPR029058 -
Lapu6g01221 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 FunFam Carboxypeptidase 376 470 - -
Lapu6g01221 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 457 IPR001563 GO:0004185|GO:0006508
Lapu6g01221 477 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Lapu6g01221 477 SUPERFAMILY alpha/beta-Hydrolases 42 471 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01221 Lapu-Chr6 12060473 12066258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01221 334 468 Calmodulin-binding Proteins AT2G22960 35.294 2.66e-17 78.2