Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01215 ATGGGCAGCACGAAATTGGAGTTGCATGTTGGGATTTTTGTCACCTGCGTGGTGATTCTCGCTGGGACTTTCTGTGTTGGAGATACTGATATGGTTGATGTTGGTGCAATCAATAGTCTATATGTTGCTCTGGGGTCGCCACCACTTCAAGGGTGGAAATCCGAGGGAGGAGATCCATGTTTAGAACTGTGGCAAGGTGTCGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAAGCATGAATTTGGGCGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTTTAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGAGCTTGTTTCTCTCGGGAAATCGGTTAAATGGAAGCATTCCAGATGCGTTGTCCTTGTTAACTCAGTTGTCAAACTTGCAATTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAATAGGGAGTTTATCATCTCTAACCACGTTGCACTTGCAAAATAATCAACTTTCTGGGACTCTTTATGTGTTGCAAGACCTGCCTCTTCAAGATCTGGATATAGAGAACAATTTATTCTCTGGGTCAATTCCTCCAAAGTTGTTGTCCATCCCTAATTTCAGTAAAAATGGGAATCCGTTTAATACTACTATTATTCCATCACCTCCTCTTGCGGCCCCTGCACCCATAGCTATGGTTCCATCCTCCCAAGAATCACCACGGAAGGGGGCATATGGTCCTTCTGCCCTGACAGCAGGGGTGCCTGCAAGTACTAGGAAGTCTTTTATAGCTAAGAGCATCATCTGGATTGCTGGTGCAGGTCTTTTTGTATTCATTGTATTGGGAGTTTGTCTTCTAATGTTGTGTTGCATTAAGAGGAGGCCAGAGAAGAAAAATGCTAAGAAACTTGATGATGTGGGTGTGTTTGGGGGGCCTTTGAATAAACCTACATGCAGTGATTCTGTTTTTGGAGCAACTAATCAAGAGGAGAAGGGTAAATGTGAAGTACCAAACAGAAGTGCAAATTTGATTCCTAAGGTTCAAGATGAACAAGACATATATGTGAAAGTAGTATCTGCGACTTCAGAATGCAATAATGGTCATCAATCAATGAACACTGGAGGGGGTTCCAAACTTTCACCCCTGCAGCCACCACCAAAACACTCTTTCCCAGCCATTTGTGGTGAGAAGACCACTATCAATCCGGCTATACCTACCAAAGAAACTGAAAAACAAGCTATGACAAATTCCATCAAAGTTTATACTGTTGCATTGCTTCAACAATATACAAATAGCTTTTCCCAAGAAAACTGTATTGGGGAAGGCACACTAGGGCCTGTTTATCGGGCTGAACTCCCTGATGGAAAGCTATTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATGGGGCAGAGTCATGAGCAATTTCTTCAATTGGTGTCCAGCATCTCAAATATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTGTTGAACATAGCCAACGACTACTTGTATACGAGTATTGCAGTAATGGGACCCTACATGATGTACTGCACGGCGATGATGATCAGCAAATCAAACTTCCGTGGAATGCACGAATTCGAGTGGCACTTGGAGCTGCCAGAGCTTTAGAGTATCTGCATGAGAACTTTCGACCACCTATTGTGCATCGAAATTTTAGGTCTACTAACGTTCTTCTGAATGGCAATTTGGAAGTGTGCGTCTCTGATTGTGGATTAGGGCCATTGTTATCTTCTGGCTCTACGGGTCAGTTATCAGGACGCCTCCTTACTGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGATGTCTTCAGTTTTGGTGTTGTAATGCTAGAACTCCTTACGGGACGAAAATCCTATGACAAGTCCAGGCCACGTGCAGAGCAATTTTTGGTCAGATGGGCTGTCCCTCAACTCCATGACATTGATACATTGTCAAAAATGGTTGACCCCTGCTTAAGCGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCAGACATTGTTTCTTCATGTCTACAGCGCGAACCTGAATTCCGACCAGCAATGTCGGAAATTGTTCAAGATCTCTTGCGAATGATGTAA 2154 0.4396 MGSTKLELHVGIFVTCVVILAGTFCVGDTDMVDVGAINSLYVALGSPPLQGWKSEGGDPCLELWQGVACVFSNITAIHLGSMNLGGQLGSNLNFPSILELDLSNNHIEGPIPFTLPPTLRSLFLSGNRLNGSIPDALSLLTQLSNLQLSNNNLSGQLPSSIGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLDIENNLFSGSIPPKLLSIPNFSKNGNPFNTTIIPSPPLAAPAPIAMVPSSQESPRKGAYGPSALTAGVPASTRKSFIAKSIIWIAGAGLFVFIVLGVCLLMLCCIKRRPEKKNAKKLDDVGVFGGPLNKPTCSDSVFGATNQEEKGKCEVPNRSANLIPKVQDEQDIYVKVVSATSECNNGHQSMNTGGGSKLSPLQPPPKHSFPAICGEKTTINPAIPTKETEKQAMTNSIKVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQSHEQFLQLVSSISNIQHANIARLVGYCVEHSQRLLVYEYCSNGTLHDVLHGDDDQQIKLPWNARIRVALGAARALEYLHENFRPPIVHRNFRSTNVLLNGNLEVCVSDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDKSRPRAEQFLVRWAVPQLHDIDTLSKMVDPCLSGAYPMKSLSRFADIVSSCLQREPEFRPAMSEIVQDLLRMM* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01215 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 405 516 - -
Lapu6g01215 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 151 - -
Lapu6g01215 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 715 IPR046959 -
Lapu6g01215 717 Gene3D Ribonuclease Inhibitor 37 229 IPR032675 -
Lapu6g01215 717 SUPERFAMILY Protein kinase-like (PK-like) 420 713 IPR011009 -
Lapu6g01215 717 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Lapu6g01215 717 Gene3D Transferase(Phosphotransferase) domain 1 517 716 - -
Lapu6g01215 717 Gene3D Phosphorylase Kinase; domain 1 403 516 - -
Lapu6g01215 717 ProSiteProfiles Protein kinase domain profile. 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01215 717 SUPERFAMILY L domain-like 44 211 - -
Lapu6g01215 717 MobiDBLite consensus disorder prediction 372 392 - -
Lapu6g01215 717 Pfam Protein tyrosine and serine/threonine kinase 442 713 IPR001245 GO:0004672|GO:0006468
Lapu6g01215 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 517 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01215 Lapu-Chr6 11984496 11992859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01215 23 717 Strubbelig Receptor Gene Family AT4G03390 51.275 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu6g01215 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01215 - - gmx:100793423 1174.07