Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01197 ATGCAGACGAGGTTCATGGAGAGATCGAGCAGCACGGCGAGGGGGAAGCGCGGTTTAGATTCAGGTTCCACCGAAGAAGATCAACCTGAAAAAAAGCGACCTGCTCTCGCTAGCGTGATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCGCTGGAGCCTATTCTTCGTAGAGTTGTTAGTGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTTCCTGCCAAGCATAGTGGAAGGTCTTCTTCTCCCAAGAGCATAGAAGGCCCTGATCACAGCAGTCTACAATTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCATGGGAGCGCCATACACATTGTTTTGATTGATACAATAACAGGCCATGTTGTCACATGTGGTCCAGCTTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATACTTGGAGTAAAGAAGATTTTGACAGTCACGTAGTTAAAGAGCGAGAAGGAAAAAGACCTCTTCTTGCTGGTGATCTGCAAGTGACACTAAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTGAACGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCATTTCACAAAAGACTAAATAAAGCAGGAATATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTACGGAATATTCTTGGGAGCGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCTGATGAAGCAAGGAATGTCGGTGTTGTTTTCAATAACATCTATGAGCTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCCGACAGTCAAAAGGTTTATGTGGACACATTGGTGAAAAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATCCCAATCAGAATAAGACTTTGGGCACCTCCCAACCTCTGGCTCCAGTGGGTTCCCATGATTATTCAATTTCAAACTCACTTGATCAGCAAACCCCCATCCCAAGTCTACCAGTTCCTGTAACTACTGCGCAGCCTTCAATGGATCCAGCCGCAACAGTCGGAGGTTATCATAATGTCACGACAACCATACCCTCAATGCAACCACAGAATGATAATCTTCATTCTTCTATTCAGTTTGATAACACTGCATTCCCACTGCAAAACCAGCTACTGAATGCTTCACTCCAATCTCAACTTCCTAGAAATGAAAATGGGCTGACTCTTGGTTCACGACAACCAGCTACTCCTGGCTTTCAGAATGTCAGCATTTCAAATCCTGGTTATAGAGGATTTGAGGACTACTTTCCAGAGGACGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTTCGTATATTTAATATGGGAGGGCAATCTCATGCTTCCTTCAATGCTCCAGAAGAAGCATACCCTTATTCATCTACTTACATGCCTGCGACCTCCAAGAGCTACAACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCAGCTGAGAGACGGGCGCAACTTGTTGAGTTGGAAGACCTATAG 1908 0.4387 MQTRFMERSSSTARGKRGLDSGSTEEDQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPAKHSGRSSSPKSIEGPDHSSLQLQFRNRLSLPLFTGGKVEGEHGSAIHIVLIDTITGHVVTCGPASCVKLDVIVLEGDFNNEDDDTWSKEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDEARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNPNQNKTLGTSQPLAPVGSHDYSISNSLDQQTPIPSLPVPVTTAQPSMDPAATVGGYHNVTTTIPSMQPQNDNLHSSIQFDNTAFPLQNQLLNASLQSQLPRNENGLTLGSRQPATPGFQNVSISNPGYRGFEDYFPEDEIRTRSHEMLENEDMQHLLRIFNMGGQSHASFNAPEEAYPYSSTYMPATSKSYNLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELEDL* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01197 635 MobiDBLite consensus disorder prediction 1 33 - -
Lapu6g01197 635 Pfam Calmodulin binding protein-like N-terminal domain 98 245 IPR046831 -
Lapu6g01197 635 PANTHER OS02G0177800 PROTEIN 14 550 IPR012416 GO:0005516
Lapu6g01197 635 Pfam Calmodulin binding protein central domain 257 323 IPR046830 -
Lapu6g01197 635 MobiDBLite consensus disorder prediction 10 33 - -
Lapu6g01197 635 Pfam Calmodulin binding protein C-terminal domain 328 390 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01197 Lapu-Chr6 11828269 11834244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01197 14 630 Calmodulin-binding Proteins AT5G57580 60.156 0.0 733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02974 3 52873582 52879649 Lapu6g01197 6 11828269 11834244 PCT