Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01191 ATGGGTGACATCGCCGGCTCCGGTCTCCGGCGAGTTATGACGCTCATCTCTTCCCTCATCTCCCTCTCTCTTTCCATCAGGGTCTTCGCCGGAAAGTGGCAACTTATTCGGAGTAGGCTGGAGGAGCTCCATTCGGCACTCGTTGCCGGCGACTCCACTTCACTATCAGGTGAGCTCCCGGCGATAACAGGCACGGTGGAGGATTGCCACGAGCTGGCAAGACCGTGCTTGGATCTGTCCTACAGCGGGAAGCTTTTGATGCAGAGCGACTTGGACGTGACTTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTATCTGAGATATTCAAGAAGCGTGTGTCTATGCATGGCTACGCTGTTGTGGTTTCACGGCCTGGTTTTGGAGCTTGCAAAGATGACATGAGGTTCTACTTAAGTGACTTAATGACTCGAATGAAGGTTGGTGATTTGGGTATGAGGAAGCAAGCGTTGATGAATCTGCACGAGGTTGTTGTGGAGGATGATAAGTATGTGAAGTTGGTGTTTGAGGTTTCTGAGTTTGTTCACTTGTTGGTGGATTTTCTGGGTTGTAATGAGGTTGAGATTGTTGAGGAGGCTGCCAAGGTTGTTTCTGTCGTCGCGGATTTTGATTTTTATAAGGGGGTTTTGGTTGGTGCTGGAGTTATTGGCCCTTTAATTCGGATTTTGGAATGTGGGAGTGAAGTGGGAAAGATTGCTGTTGTGACGTGTTTGTATAGACTAACCGAGAATTCGGATAATGCTTGGTGTGTTTCAGCTCATGGGGGTGTCACTGTCTTGTTGAGGATTTGTGAGAGTGTAGAGTGTAAGGGAGAATTGGTTGGTCCTGCTTGTGGGGTGTTGAGGAATCTTTGTGGGGTTGAGGAAATCAAGAGGTTTATGATTGAGGAGGGCGCGGTTTCCACGTTTGTGAAGCTTGTAAGGTCTAAGGATGAAGTTGTTCAAGTTAGTTCTATTGAGTTGATTCAAAACATTGCCTCTGGTGATGAGTTGGTTAGGCAGATGGTGGTTAGAGAAGGAGGGGTTCGTGTTCTTTTGCGTGTTTTGGATCCAAAGTGGACGTGTTCGTCTAAAACAAGAGAAGTTGTGATGAGAGCTGTTGAGAATTTGTGTTTTTCTTCTTCTAGTTGTGTTAGTCTTTTGCTGAGTTATGGCTTTGTGGATCAGTTAATGTATTATGTTCGAAATGGGGAGGTATCGATTCAGGAGTTGGGGCTGAAGGTAGCGTTTAGATTGTGTGAAGCATCGGAGGAGGCCAAGAAGGCATTAGGTGATGCCGGCTTCATGGCTGAGCTTGTGAAGTTTCTAAATGCGAAATCGTTTGAAGTTCGAGAAATGGCAGCAGAGGCACTCTCTGGAATGGTTATGGTGGCTAAAAATAGGAAGAGGTTTGTGCAGGATGACCAAAACATTGCTCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGAAATTCTGGTAACAAAAAGTTGTTGATCTCTATCTTGATGTCACTAACAAGTTGCAACAGTGGGAGGAAAAAAATTGTGAGCTCAGGGTACGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCTGATGCCAAGAGGCTCGTCAGGAAGCTATCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCCTGA 1674 0.4677 MGDIAGSGLRRVMTLISSLISLSLSIRVFAGKWQLIRSRLEELHSALVAGDSTSLSGELPAITGTVEDCHELARPCLDLSYSGKLLMQSDLDVTLGKLEAHVKKLSEIFKKRVSMHGYAVVVSRPGFGACKDDMRFYLSDLMTRMKVGDLGMRKQALMNLHEVVVEDDKYVKLVFEVSEFVHLLVDFLGCNEVEIVEEAAKVVSVVADFDFYKGVLVGAGVIGPLIRILECGSEVGKIAVVTCLYRLTENSDNAWCVSAHGGVTVLLRICESVECKGELVGPACGVLRNLCGVEEIKRFMIEEGAVSTFVKLVRSKDEVVQVSSIELIQNIASGDELVRQMVVREGGVRVLLRVLDPKWTCSSKTREVVMRAVENLCFSSSSCVSLLLSYGFVDQLMYYVRNGEVSIQELGLKVAFRLCEASEEAKKALGDAGFMAELVKFLNAKSFEVREMAAEALSGMVMVAKNRKRFVQDDQNIALLLQLLDPGEGNSGNKKLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01191 557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 304 347 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 167 208 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 293 333 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 250 292 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 422 462 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 209 249 IPR000225 GO:0005515
Lapu6g01191 557 SMART arm_5 335 378 IPR000225 GO:0005515
Lapu6g01191 557 Gene3D - 138 546 IPR011989 -
Lapu6g01191 557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 261 305 IPR000225 GO:0005515
Lapu6g01191 557 SUPERFAMILY ARM repeat 141 539 IPR016024 -
Lapu6g01191 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01191 Lapu-Chr6 11770990 11772968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01191 109 409 U-box Gene Family AT2G23140 23.432 3.34e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01191 - - gmx:100783537 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02959 3 52695398 52697868 Lapu6g01191 6 11770990 11772968 PCT