Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01183 ATGAACAATGCAACCATGACACCGTCTAATATGTCAGATAAATCCATAGTTTGCTATACACCTCTCATGACAACAACAAATGGCTTTTGGAAGGGCGATAACCCTTTAGATTACTCTCTTCCTCTGTTTATCTTGCAGATAACATTAGTTGTATGTGCCACACGTTTCTTTGTTTTAATCCTCAAGCCATTTCACCAACCTCGTGTAATTGCTGAAATATTGGGTGGATTGCTTTTGGGTCCATCAGTGTTGGGTAGAAATCAGAAATTTGCCAATATTGTGTTCCCTCTGAAAAGTGTAATGGTGGTGGAGACAATGGCAAACATGGGTCTGATATACTTCGTGTTCTTGGTTGGGCTAGAGATGGACATTTCGATCATCAAACGCACTGGAAAGAAAACAGTGTCCATAGCCCTTGCTGGTATGTTAATGCCCTTTTTGGTTGCTATTTGTTTATCCTCTTTAATAGTTGACACAAACAAAAGTATAAACCAAGCCAATTGTGTCCTCTATCTTGGTATTGTTCTATCCGTCACTGCATTCCCGGTGCTTGCTCGCATGCTTGTTGAGCTCAAACTCATCAACACAGACTTAGGGAAGCTTGCTCTATCGATTTCTCTCATCAATGATGTGTGCGCATGGATGTTATTGGTTTTAACTATTGCTTTATCAGAGGAAAGAGCTGGCATTTGGGTCTCTTTGTGGGTTATACTTTCAAACCTTGTTTTTCTTTCTTTCTCCTTTGTTATTGTTAGACCAATGATGTCGTGGTTGATCGAGAAAACCCCAGAAGGAAAACCCTTCAGTGAGTTTCAATTATGCATTGTGCTCACTGGTGTCATGATCTCAGCCTTCATCACAGATGTCCTTGGAACACATTGTATTTTTGGAGCTTTTGTGTATGGCTTAGTTATTCCACATGGGCCACTTGGAGCTGCAATAATAGAAAAGCTAGAAGACTTTGTTTCAGGGCTTTTGCTTCCTCTCTTTTATGCCGTTAGTGGGCTTAAGACCGATATCAGCTTGATTAGTGGAGCTAATACTTGGACTTTTGTGCTCTTGGTGATTCCTCTCTCTTATCTTGGCAAGGTTTTTGGGACTCTCCTTGTTTCAAACATGTTTCAGATACCAAATCGTGATGGGGTTGTTCTTGGTTTACTTATGAACTCTAAAGGACTCATTGAAATTATTGTGCTTAATATTGGAAGGGAACAAAAGGTCTTGAATGATAAAATATTTTCAGTTATGATCATTGTAATACTGATAATGACAACATTCGTTTCACCCTTTGTAACATTAGTTTATAAGCCAAGAAAAAGGCTTGTACCTTATAAAAGGAGAACAATTCAAAATTCAAGACTTGATGGAGAGTTAAGAGTCCTTGTGTGTATTCACACCCCAAGAAATGTTCCCACACTAATTAATCTCCTTGAAGCAACTTACCCACATAAAAGATCTCCCATGTGCGCTTACGTGCTTCACTTGGTTGAACTCACTGGTAGAGCTTCTGCCATGCTCGTTGTCCATGCTGACAGACAATCAGGAGGCCCAGCCCTCAACAAAACACAAGCACAAACTGACCACATCATCACTGGATTTCAGAACTTTGAGGAACAGGTCAGTCATGCTCAAGTCCAACCCTTAACAGCCATTTCCCCTTACTCCACCATGCATGAAGACATATGCAATTTGGCCGAGGACAAAAGGGTGTCCATCATCATCATTCCTTTCCATAAGCAACAAACAGTTGATGGAGAAATGGAAGATACAATCCCAGCATTCAGAATGGTGAACCACAATCTACTACAAAATTCACCATGCTCAGTTGGTATACTTGTGGATAGAGGCCTTAACGGATCCAATCGCTTGATTGGAAATCTAGCAGCTCATCAAGTGGCTGTGCTGTATTTTGGAGGACCAGATGATAGAGAGGCATTGGCTTATGGATGGAGAATGTCAAGACATCCAAGGGTTCGCCTTACTGTCATGCACTTCATTCCAAGCCAATATCCAAATCAAACTCCAGAAACAGATCACTTATGGGCCAAGATTGATAGAAGTTTCACCACTATAAAAAATGGTAGAGAGAACAAACTAGATGAGGAGTATATAGGTGAGTTTAAGAAGATGATTGCGCATGACGATTCAGTGGTTTACATAGACAAGGTTGTGAACAATGGAGAGGAAACAGTTGCAGCAATAAGATCAATCAATAATGTGAACGACTTGTTCATAGTTGGGAGAGGACAAGGGATAGTGTCACCACTAACAGATGGCCTAACAGATTGGAGTGAGTGTCCTGAATTGGGAGCTATTGGAGATTTGCTAGCCTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGTTGCATCAATATGTAGCGCAAGGACCAGATGGGGAGGACAATTTCGTGGTTGAAAGACCATGGGAATCAACTGAACACTACCAAAACATACATCAACATCAACACCTACACCAACATATACCAAGATATGCAATGCCAATGGGAACAGAACATTCTTTTTCATAA 2532 0.4072 MNNATMTPSNMSDKSIVCYTPLMTTTNGFWKGDNPLDYSLPLFILQITLVVCATRFFVLILKPFHQPRVIAEILGGLLLGPSVLGRNQKFANIVFPLKSVMVVETMANMGLIYFVFLVGLEMDISIIKRTGKKTVSIALAGMLMPFLVAICLSSLIVDTNKSINQANCVLYLGIVLSVTAFPVLARMLVELKLINTDLGKLALSISLINDVCAWMLLVLTIALSEERAGIWVSLWVILSNLVFLSFSFVIVRPMMSWLIEKTPEGKPFSEFQLCIVLTGVMISAFITDVLGTHCIFGAFVYGLVIPHGPLGAAIIEKLEDFVSGLLLPLFYAVSGLKTDISLISGANTWTFVLLVIPLSYLGKVFGTLLVSNMFQIPNRDGVVLGLLMNSKGLIEIIVLNIGREQKVLNDKIFSVMIIVILIMTTFVSPFVTLVYKPRKRLVPYKRRTIQNSRLDGELRVLVCIHTPRNVPTLINLLEATYPHKRSPMCAYVLHLVELTGRASAMLVVHADRQSGGPALNKTQAQTDHIITGFQNFEEQVSHAQVQPLTAISPYSTMHEDICNLAEDKRVSIIIIPFHKQQTVDGEMEDTIPAFRMVNHNLLQNSPCSVGILVDRGLNGSNRLIGNLAAHQVAVLYFGGPDDREALAYGWRMSRHPRVRLTVMHFIPSQYPNQTPETDHLWAKIDRSFTTIKNGRENKLDEEYIGEFKKMIAHDDSVVYIDKVVNNGEETVAAIRSINNVNDLFIVGRGQGIVSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVLHQYVAQGPDGEDNFVVERPWESTEHYQNIHQHQHLHQHIPRYAMPMGTEHSFS* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01183 843 Pfam Sodium/hydrogen exchanger family 50 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g01183 843 PANTHER CATION/H + ANTIPORTER 17 794 - -
Lapu6g01183 843 FunFam Cation/H(+) antiporter 15 42 442 - -
Lapu6g01183 843 Gene3D - 42 441 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01183 Lapu-Chr6 11687261 11690323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01183 12 814 Antiporter Super Family AT2G13620 61.519 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01183 K26731 - gmx:100800514 1428.69