Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01182 ATGGAGTTTGATCTCGAAAACCCACTAGTCAGCTTGGAAGAAGAGCAAACCTTTACTGTATCAGAACTCTTTGCCATCGAATCAGATCACATGCCCTCACAAAACTACTTAAGTCTAACACATTTTCACGTTTTCTGTTGTGAGGCCATATCTCTCATTCTTCAGGTTCAGCTTTCTTACAAATTGGACCGTTTTGTAGCTTATCTTGCTATTAATTACATGCACCGTTTCATGTCAAGCCAGGAAATTCTGAAGGGGAAACCGTGGTATCTTAGGCTTGTTGTCGTATCATGTCTTTCTCTTGCTTCAAAGATGAAAAACACAACTTTGCCATTTTTGGAAATGCAGAAAGAAGGTTGTAACTTTAAGGCTCAAAGTATTCGGAAAATGGAGCGTCTGATTCTCGGGGCACTAAAATGGCGTATGAGGTCAATTACACCTTTTTGTTTCCTGCGCTTCTTCGTCTCTTTTGCTGAAATTGAAGACCAATCACTGAAGCAAGCACTTAAAGAGAGAGCTTCTGTGATAATTTTCAATGCTCAAAATGACATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCAACTGCCCTTATCATTGCATCTCATGAACTACTCCCACATCAATATTCTATTCTGAGAGCTTCAATTATAGCCAGTGAGTACATAGATGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATAAGAATGGTGGCCAAGGAGTTAATGACAGATACAAGCTTTTTAAGAACAGAAACTCCAGTGAGTGTGCTGAGAAACACCAAACGGCAAAGAATTTAA 816 0.3909 MEFDLENPLVSLEEEQTFTVSELFAIESDHMPSQNYLSLTHFHVFCCEAISLILQVQLSYKLDRFVAYLAINYMHRFMSSQEILKGKPWYLRLVVVSCLSLASKMKNTTLPFLEMQKEGCNFKAQSIRKMERLILGALKWRMRSITPFCFLRFFVSFAEIEDQSLKQALKERASVIIFNAQNDIKLLEYKPSTIAATALIIASHELLPHQYSILRASIIASEYIDEETLSKCFDLMQEMIRMVAKELMTDTSFLRTETPVSVLRNTKRQRI* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01182 271 SUPERFAMILY Cyclin-like 126 245 IPR036915 -
Lapu6g01182 271 CDD CYCLIN_AtCycD-like_rpt2 145 236 - -
Lapu6g01182 271 FunFam D6-type cyclin 140 234 - -
Lapu6g01182 271 SMART cyclin_7 51 136 IPR013763 -
Lapu6g01182 271 SMART cyclin_7 152 238 IPR013763 -
Lapu6g01182 271 SUPERFAMILY Cyclin-like 20 142 IPR036915 -
Lapu6g01182 271 Gene3D - 33 143 - -
Lapu6g01182 271 PANTHER CYCLINS 50 240 IPR039361 -
Lapu6g01182 271 Gene3D - 22 234 - -
Lapu6g01182 271 FunFam D6-type cyclin 32 139 - -
Lapu6g01182 271 Pfam Cyclin, N-terminal domain 45 142 IPR006671 -
Lapu6g01182 271 Pfam Cyclin, C-terminal domain 145 240 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01182 Lapu-Chr6 11682117 11683441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01182 1 263 Core Cell Cycle Gene Families AT4G03270 38.489 2.74e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01182 K18812 - gmx:100799985 431.795