Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01176 ATGGATTTCACAAGACTAACACTTGCTTTGATCACAGTCTGCTGTTTTTGCCAGTGCTTGAGTACTGCCAATGATACCATTACATCAGGCCAATTCATCAGAGATACTCAAACTCTGATCTCAGCTAACAGTGTCTTCAAGTTAGGATTCTTCAGCCCTCAAAATTCATCATTTCGCTACCTGGGAATCTGGTATCTCTATGACTCCAATGTCATATGGGTAGCTAACAGAAACCGGCCGCTGACGAACAACTCTTCCGGGCTTGTTCTAATCTCTATATATGGCAATCTTGTGGCGTTAGATAGCAACAAAAGGGTTGTTTGGTCATCAAATGTGACACATGTTGCAACCAATTCAACTGCCAAACTTTTGGATACAGGAAACCTCGTCCTGCTAGATGGTGTCACGGGACAAAGTGTATGGGAGAGTTTCCAACATCCAAGTCACGCTCTCGTGCCAAAGATGAAATTTGGAACTAACAAAAGAACAGGTGAGAAAGTACGCATAACATCGTGGAGAAGTCCTTCTGATCCTTCTGTCGGGTACTATTCTGCTACTCTTGAACACCCCAACTCACCAGAAATGATTTTCTGGTTGAATGAAACGCAACCGTATCATCGTTCTGGTCCATGGAATAATCAGATTTTTATTGGCTCGCCCGAGATGTCACCTGGTTATCTAAACGGATGGAGTATGATGAATGATGGAGAGGACGAAACTGTTTATCTTTCTTATAATTTGCCAAATCAATCTTACTTTGGAATCATGACCTTGAATCCACAGGGTCAAATTGAATGCTCATGGTGGAACAACGAAAAGTTAGTTCAGAGGATGGTGGTGAAAAGAAATCTATGCGACCTTTATGGCTATTGTGGGGCATTTGGAACCTGTAATTTTCAGAGTTCACCGATATGCAGTTGTTTGAGTGGATATAAGCCCAAAAGTGCAGAGGAGTGGAATAGAAAAAATTGGACTAGTGGGTGTGTAAGGAGTGAGCCACTGCACTGTGGGGAACTCACAAATGGAAGTGAAGTCAGCAAAGATGTGTTTTTGAAGCTTGAGAATATGAAAGTGCCAGACTTTGTACATAGGTCAGATTCTTTGGAAGATGAATGCAAAGCAGAGTGTTTGAAGAATTGCTCTTGTGTAGCCTTTGCATATGACAGAGGCATTGGATGCATGGTATGGAGTGGAGACTTGATTGACATACAGAAGTTCTCAAGTGGAGGAGTTGATCTTTACATTCGCGTGCGACCTTCAGAAATCGAAAAAAATTCAGATAAAAGAAGAAAAAGGAGATTTATAATTCCAGTTGGAATTGGAGTACCTATAGGAATGATTATCTTGGCAGGCTGCCTTTATCTCTCATGGAAATGCAGTGGTAAATCAACAGGAAAAATATATTCCCAAAGGAAAAGAATGAGCAAAGATCAGAAACAGGTCAAATTGAATGATCAGTTACCGCTTTTTACTTTTGAAGAACTTGTAAATGCTACAAACAATTTTGACTCGGCCAATGAGTTAGGTAAAGGAGGTTTTGGTTCAGTATATAAGGGACAATTGAAAGAGGGACCTGAAATTGCAGTTAAAAGACTTTCAGAAACTTCTGGACAAGGACTAGAAGAATGCATGAATGAGGTATTAGTGATTTCAAAGCTTCAACATCGTAATCTTGTCAAACTTCTTGGCTGCTGTATTAAACACGAGGAGAATATGTTGGTATACGAGTACATGCCTAACAAGAGTTTGGATGTAATATTATTTGATCCAGTAAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGACTGCTTTATCTCCATAGAGATTCTAGACTAAAAATTGTGCACCGAGATTTAAAAGTTAGTAACATCTTGTTAGATGAAGATTTCAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTTGGAGGCAATGATATACAGGCCAATACCAGAAGGGTTGTTGGAACATTTGGTTATATGTCTCCAGAATATGCATTCAGAGGGTTGGTTTCTGAGAAATTAGATGTATTCAGCTTTGGAGTCTTGTTGCTAGAAATTATCAGTGGGAGAAAAATCAGTAGCTATTACGATCACGACCAATCATTGAGTCTCTTGGGATTTGCTTGGAAATTATGGAATGAAAAGAACATCCAATCCCTGATAGATCCAGAAATATCTAATCCAAATAATGTAGATGACATAGTGAGAAGCATGCACATCGGACTTCTTTGTTTGCAAAATCTTGCAGAAGAAAGGCCAATTATGGCTACAGTAGTTTCAATGCTGAAGAGTGAGATTGTTAATCTTCCTTGCCCTTCACATCCTGCATACGTGGAAAGGCAAATTGTATCGAGTGCAGAGTCATCTCAACAGAGAACATACTCCATCAACGATGTTACTGTCACAGACATGATGCAAGGTAGATAA 2460 0.3955 MDFTRLTLALITVCCFCQCLSTANDTITSGQFIRDTQTLISANSVFKLGFFSPQNSSFRYLGIWYLYDSNVIWVANRNRPLTNNSSGLVLISIYGNLVALDSNKRVVWSSNVTHVATNSTAKLLDTGNLVLLDGVTGQSVWESFQHPSHALVPKMKFGTNKRTGEKVRITSWRSPSDPSVGYYSATLEHPNSPEMIFWLNETQPYHRSGPWNNQIFIGSPEMSPGYLNGWSMMNDGEDETVYLSYNLPNQSYFGIMTLNPQGQIECSWWNNEKLVQRMVVKRNLCDLYGYCGAFGTCNFQSSPICSCLSGYKPKSAEEWNRKNWTSGCVRSEPLHCGELTNGSEVSKDVFLKLENMKVPDFVHRSDSLEDECKAECLKNCSCVAFAYDRGIGCMVWSGDLIDIQKFSSGGVDLYIRVRPSEIEKNSDKRRKRRFIIPVGIGVPIGMIILAGCLYLSWKCSGKSTGKIYSQRKRMSKDQKQVKLNDQLPLFTFEELVNATNNFDSANELGKGGFGSVYKGQLKEGPEIAVKRLSETSGQGLEECMNEVLVISKLQHRNLVKLLGCCIKHEENMLVYEYMPNKSLDVILFDPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIVHRDLKVSNILLDEDFNPKISDFGMARIFGGNDIQANTRRVVGTFGYMSPEYAFRGLVSEKLDVFSFGVLLLEIISGRKISSYYDHDQSLSLLGFAWKLWNEKNIQSLIDPEISNPNNVDDIVRSMHIGLLCLQNLAEERPIMATVVSMLKSEIVNLPCPSHPAYVERQIVSSAESSQQRTYSINDVTVTDMMQGR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01176 819 SMART blect_4 30 147 IPR001480 -
Lapu6g01176 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Lapu6g01176 819 CDD B_lectin 37 147 IPR001480 -
Lapu6g01176 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Lapu6g01176 819 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Lapu6g01176 819 ProSiteProfiles Protein kinase domain profile. 502 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01176 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 764 - -
Lapu6g01176 819 Pfam Protein tyrosine and serine/threonine kinase 505 772 IPR001245 GO:0004672|GO:0006468
Lapu6g01176 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 144 - -
Lapu6g01176 819 SMART ntp_6 345 417 IPR003609 -
Lapu6g01176 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 577 - -
Lapu6g01176 819 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Lapu6g01176 819 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Lapu6g01176 819 CDD STKc_IRAK 508 774 - -
Lapu6g01176 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lapu6g01176 819 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Lapu6g01176 819 CDD PAN_AP_plant 333 417 - -
Lapu6g01176 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 213 IPR036426 -
Lapu6g01176 819 SUPERFAMILY Protein kinase-like (PK-like) 485 795 IPR011009 -
Lapu6g01176 819 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Lapu6g01176 819 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Lapu6g01176 819 Pfam PAN-like domain 345 403 IPR003609 -
Lapu6g01176 819 Pfam D-mannose binding lectin 71 173 IPR001480 -
Lapu6g01176 819 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Lapu6g01176 819 SMART serkin_6 502 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01176 819 Gene3D - 18 145 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01176 Lapu-Chr6 11642420 11645933 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01176 471 815 Receptor kinase-like Gene Family AT4G11530 51.676 6.31e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g01176 PK_Tyr_Ser-Thr 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01176 - - gmx:106794168 1384.39