Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01160 ATGTTTGAGGCTTGGCTTTCTCTCAAGAAGACCCTTCAGTGCAAACCTCATCCAAATCATGTTCATGATCCAAAGACTATTATTAGGCAACAAAAAGGTAATCAGAGAACAAAGTTAGGCAATCTTGAGAGTTCAAATACCAAAGATTTCATCCAAGGAAGCAAGAGGCACTCAAAAAATCCCTTAAGTTTCAAAGGGGACATTGACATCACTGCTCCCATTATCGATGAAATTACTCTTGATGGCTCAAACCATGAGACCAGTCGACGTTTTCCTTGTCCTCAAAGCAATAGCAGCAAAAAAGCTTCGCATAGAACACGCAGGTCAGCTACATATTCAAGAATAACATATCCTGTAGATCACAATGAAGCAAATGTCTCCTCCAATACAAGGACGTTGGTTCAGATGGATTCTGATGATTGTTCATCATTGACATGTCATAAATGTGGCGAGAAATTAAAGAATCTTGTTGCTGTAGAAGCACACCATGTCTCCGAACATTCAGTGATTGAACTTGAGGAGGATTCATCCAGACAGATTATAGAAACAATATGTGGAACAAGCTCGGTTTATTCTGAAAGCATGTTGGGTGAGATTGATTGCATCTTAAAGGTTGTGAATATACCAAAAACCTTTGCTTGCTTTGAGGAGTATAGAGAAAAGGTGAAGCAACAGGCTGACAAACTACACAAGAGGCACCCTCGTTGTGTGGCTGATGGAAACGAACTTTTAAGGTTCCATGGCACAACCATTGCATGCTCTCTCGGCATAAACAGTTCTTATAGCCTGTGCACTTTAGACTATTGTGGTATATGTCAAATTCTGAGACATGGGTTCTCGACCAACAAGGAATTCAAAGGTGCATTAGGGGTTTACACCACTTCCACCAGTGGGAAAGCCTTTGAATCCATTTCCATTATGACATCCCATGAGAGACCATTTTCAAGAAAGTCCATCATAGTGTGCAGAGTAATAGCTGGAAGAATTTACAGCCCTCCTGAAGGAATTGAAGAAAGGGCCGATTCATTAGCAGAAAAAATAAATGGGCATTCTGATGTTGAGGAACTGTACGTGTTGAATCCCAGAGCCCTTCTCCCTTGCTTTGTGGTAATCTACAAACAGCAAACAGCCAAGGTTAGAAGGTTCAGCCCAAGCTTAAGGATAAGTAGCTTTTAA 1176 0.409 MFEAWLSLKKTLQCKPHPNHVHDPKTIIRQQKGNQRTKLGNLESSNTKDFIQGSKRHSKNPLSFKGDIDITAPIIDEITLDGSNHETSRRFPCPQSNSSKKASHRTRRSATYSRITYPVDHNEANVSSNTRTLVQMDSDDCSSLTCHKCGEKLKNLVAVEAHHVSEHSVIELEEDSSRQIIETICGTSSVYSESMLGEIDCILKVVNIPKTFACFEEYREKVKQQADKLHKRHPRCVADGNELLRFHGTTIACSLGINSSYSLCTLDYCGICQILRHGFSTNKEFKGALGVYTTSTSGKAFESISIMTSHERPFSRKSIIVCRVIAGRIYSPPEGIEERADSLAEKINGHSDVEELYVLNPRALLPCFVVIYKQQTAKVRRFSPSLRISSF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01160 391 MobiDBLite consensus disorder prediction 81 110 - -
Lapu6g01160 391 ProSitePatterns Zinc finger C2H2 type domain signature. 146 167 IPR013087 -
Lapu6g01160 391 MobiDBLite consensus disorder prediction 85 100 - -
Lapu6g01160 391 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 372 - -
Lapu6g01160 391 SUPERFAMILY ADP-ribosylation 222 375 - -
Lapu6g01160 391 Gene3D - 161 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01160 Lapu-Chr6 11479486 11481127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01160 4 373 C2H2 Transcription Factor Family AT5G54630 42.094 5.06e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01160 - - gmx:100792577 601.668