Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01157 ATGGCGCAGAAGCAGAAGCGTCCCTCCCCTCTTGATGAGCCACCCACGGCTTCTTCTTCAGATTCCGAAGAAGAAGAAACGCGTCAGCCATCCTCTCTGCAGCATGGAGAGGAAGAGGAAGAGGAAGAAGAAGCTTCATCGGGAGAAGAGGAAGAAGAGGCCTCCTCTGGAGAGGAGGCAGAAGATGATGATCTTCCACCACCTATCACCAAAGTCAACCCTCCCCCTCCCTCAAACCCCCACCCTCAACCCTCATCCTCTGATTCTGAAACAGAATCCGAATCCGAGACCGAATCCGAAACGGAATCCACTCCCGCTAAGGCGGTGAAGCCCCTTGCGTCCAAGCCTATGGACCAAGCCCAGAAGCTCAAGGCCCTACCTTCTCCGGTGCCACCCAAACCGGCATTGAAACGAGCCGCGGAGAATAGCAGCGCACACGTCGCGAAGAAGAAGAAGAAATCTGGCGACTCTTCTTCTTCCCCTGTCGCTTCCGACGAGGAGATGGAGGACGGAAAGAAGTCCGGCGATCAACTGAAGAGGTTTCAGAGGCTGTGGAGCGAGGAGGACGAACTCGCCATTCTGAAGGGCTTGGCAGAGTTCACCTCAAAAACAGGGCACGACCCTCTTAAGTATGCGGGTGGTAATGCTTTCCATGATTTCCTGAAGAAGTCGCTCCATGTGGAAGTTACCAGCAACCAGCTGAAGGAGAAGGCACGGAGGTTGAAGAAGAAGTATGAAACCGCTGCAGTGAGAGGGAATGGCGCTGATGGCCTTACGTTTTCAAAGCCGCACGATCAGAAAACGTTTGAGTTGTCGAAAAAGGTCTGGGGAAGTGAGGAAGATGGTGGAGTAGCCAATGGGGCGGTGGAAAAGCCCAAGGCTAATGGGAATGCTGCTAAGAGTCCGAAGAAGAAGGAGACCGGTAGCAGGAACGTTGCTTCTGCCAAGAAACCTAAACCTGAACCGAAACAGGAGCTGTTGCAGCCAGTGGCGTCCTTGGGGTTGAAGGAATCTGAAAAGATGCAGATTGATCCAAAGCCTGATTGTTGTGAAGTGAGTATGTTTTTGCATGCAGTGTCCCGATTTACAGAGGGTCCGGGTGTTTGTGGGCTGGACGAGGGTGATGTGAAGATGGGGTTGGAGTTGATTGGAGAATCGAAGAGGGCAGAGTTGAGGGCAAAGTGGAAGAAACTACAACGTACCGAGTTGGAACTTTTTGCTGATCGCTCAGAACTGATTGGGGAGCAGACTAAGTTAATAGTTGAGGCACTTCGGTCATCCAACCATTAG 1290 0.5233 MAQKQKRPSPLDEPPTASSSDSEEEETRQPSSLQHGEEEEEEEEASSGEEEEEASSGEEAEDDDLPPPITKVNPPPPSNPHPQPSSSDSETESESETESETESTPAKAVKPLASKPMDQAQKLKALPSPVPPKPALKRAAENSSAHVAKKKKKSGDSSSSPVASDEEMEDGKKSGDQLKRFQRLWSEEDELAILKGLAEFTSKTGHDPLKYAGGNAFHDFLKKSLHVEVTSNQLKEKARRLKKKYETAAVRGNGADGLTFSKPHDQKTFELSKKVWGSEEDGGVANGAVEKPKANGNAAKSPKKKETGSRNVASAKKPKPEPKQELLQPVASLGLKESEKMQIDPKPDCCEVSMFLHAVSRFTEGPGVCGLDEGDVKMGLELIGESKRAELRAKWKKLQRTELELFADRSELIGEQTKLIVEALRSSNH* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01157 429 MobiDBLite consensus disorder prediction 280 328 - -
Lapu6g01157 429 PANTHER BNAANNG10740D PROTEIN-RELATED 76 423 IPR007592 GO:0006355
Lapu6g01157 429 MobiDBLite consensus disorder prediction 36 63 - -
Lapu6g01157 429 MobiDBLite consensus disorder prediction 297 323 - -
Lapu6g01157 429 MobiDBLite consensus disorder prediction 21 35 - -
Lapu6g01157 429 MobiDBLite consensus disorder prediction 1 176 - -
Lapu6g01157 429 MobiDBLite consensus disorder prediction 68 83 - -
Lapu6g01157 429 Pfam Protein of unknown function, DUF573 181 277 IPR007592 GO:0006355
Lapu6g01157 429 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01157 Lapu-Chr6 11468134 11469773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01157 6 423 GeBP Transcription Factor Family AT1G61730 31.280 4.23e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lapu6g01157 DUF573 1.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01157 - - gmx:100791520 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01157 6 11468134 11469773 Lapu6g01157 6 11468134 11469773 ECH