Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01151 ATGGTGACAGGAGAAAGACAAGCCGCGAGAATTCGCGACTTGTACTTGAAAACTGTATTGAAGAAGGACTTTGCTTTCTTTGCCACTGAGACAACATCTGGTGAGGTAATTGGGAGAATGTCTGGTGACACCATTCTCATTCAAGATTCCATGGGAGATAAAGGAAATCATTCACCTTCTAATGGTGCAGTTGGTGCAAGGCATGGATTTCTTCAGATGAAGTTTTTCTCAAAGGATTGTGCATATGCCAAGGTAAAGCGTGAAGAGGCAAGTCAGGTGGCAAATGATGCTGCTGGTAGCATCAGAACCATCCTAGCATTTTGTGCAGAATCAAAGGATCGGTTCTTGTGCAACATGCAACTTTTTGAGAGGTTTTCAAGCAATCGGCATTTCCCACCTAGTGCCTTCGCAGCAGACACCAATAAAGCCAAAGAATCAGCAACTTCAATATTTAACATTCTTGACATTACACCTATCATTGACTCCAGCGGCAATGAGGGTAGAACACTAGAAGCCATAGTTGGTGATATTGAACTTCAACACACTGTTGCCTGGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTGATCGGCCTCTTCGAGAGTTTTTACAACCCCCATACTAGACGTATACTACTAGATAGAGTGCATATCGAACAGTTTAGACTAAACTGGTTGAGGCAGCAAATGGGTTTAGTTGGTGAAGAACTTATTTTCTTCAATGAAAGCATTCGTGCCAACTTAGCTTATGGCAAAGAGGGAATTGTTACAGAGGAAGAGATGAGTGCAGCAGCTATAACATCCAATGCACACCAGTTCATATGTGCTCTGCCTGAAGGCTATGATACCCATGTTGGAGAAAGAGGCACATAA 873 0.4296 MVTGERQAARIRDLYLKTVLKKDFAFFATETTSGEVIGRMSGDTILIQDSMGDKGNHSPSNGAVGARHGFLQMKFFSKDCAYAKVKREEASQVANDAAGSIRTILAFCAESKDRFLCNMQLFERFSSNRHFPPSAFAADTNKAKESATSIFNILDITPIIDSSGNEGRTLEAIVGDIELQHTVAWVGESGSGKSTVIGLFESFYNPHTRRILLDRVHIEQFRLNWLRQQMGLVGEELIFFNESIRANLAYGKEGIVTEEEMSAAAITSNAHQFICALPEGYDTHVGERGT* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01151 290 PANTHER ABC TRANSPORTER B FAMILY 1 56 IPR039421 -
Lapu6g01151 290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 53 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g01151 290 Gene3D - 181 290 IPR027417 -
Lapu6g01151 290 SUPERFAMILY ABC transporter transmembrane region 2 112 IPR036640 GO:0005524|GO:0016020
Lapu6g01151 290 Pfam ABC transporter 175 261 IPR003439 GO:0005524
Lapu6g01151 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 290 IPR027417 -
Lapu6g01151 290 Gene3D ABC transporter type 1, transmembrane domain 1 64 IPR036640 GO:0005524|GO:0016020
Lapu6g01151 290 Gene3D ABC transporter type 1, transmembrane domain 65 165 IPR036640 GO:0005524|GO:0016020
Lapu6g01151 290 Pfam ABC transporter transmembrane region 2 54 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01151 Lapu-Chr6 11432974 11434782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01151 1 56 Calmodulin-binding Proteins AT2G36910 36.842 2.20e-06 47.4