Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01150 ATGGCGGGTTTTGGTGCTGAAAGTGACGTCTCTTGCTTGCAAACCATCAAGAACTTGGACCAAGTTAATCTCTTATCCAGCTGGGATTTCGAGAGCAACACTGAGGGTGGCATATGTAGATTCAGCGGTGTTGAATGCAGCAATCATGTGGAAGATAGAGTAATCGGTCTCTGGCTTTCTAACATGGGGCTGAAGGGCCAGTTTCCCCCTTGCATTGAAGATTTCACTTGGTTGCAGACTCTGAGCCTTTCTCACAACGAGCTTTCTGGATATATCCCAAATGAAATGTCAGCTAAGCTGCCATATCTGGCAACACTTGATCTCTCAAATAACTATTTCTCTGGTGAAATTCCAAAGGGTATTGCCCATTTGTCAGGCTTAATTACCCTTCTACTTGATGGCAACCAGTTAACGGGCCAAATCCCACAAGATCTTGGGTTGCTTCCCTGGCTTAGAGATTTTAGTGTTGCTAACAACTTGTTGGAAGGGCCAGTGCCTGTTTTTGTGAGCAATGTTAACGTGAGTTTGAGTTATGCCAATAATAGTGGACTCTGTGGGGGAATACTAGGAACCTGTGATGAGAGCTTGTTTGGTAGATCGTTTTGGTATAGTTTTATTGTTGGTTTTGTTTCCTCAGCTACTTCTGTTATAGTATCTTTCATGTACTATTATGCACCTTGGACAGAACTAAAAAAGAGGAGGAGTAACGCTATTCATCCCCTAATCAAGAAGCAGAACACTAGACAAGAAGCTGAATTGCTACCACTGACCTTGCGAGAGCAAGGAAGCAAAGAGCTATCAATATGGTTGGAGAGATTGGTTACTAGAATGAGTTTCACGGAGTTATGCAAAGCAACTGATTACTTTTGCACAGATAACGTATTGGGGATAGGAACGACAGGGATTACGTACAAGGCAAAAGTATCAAATAACTGTTTTCTGGCAGTTAAGAGATTATATGATGCTGAGAGGTACAGGAGGGAATTCTTACTTGAAACAATGATTCCGGGAAGACACAGGCACAGAAACATAGTTCCACTGCATGGATTCTGCATAGAGAAACAGGAAAGGGTTTTGGTGTATGAGTACATGTCTAATGGAAGACTCAGTGATTGGTTACAATCTGATGAGGGACATCAACCAATAAAATTAGAATGGCCTGAGAGGATTCACATTGCACTTGGGGTTGCAAGAGGTTTATCTTGGCTCCATAAAAGGTGCAAGATAGTCCACCTCAGTTTAGATTCGGAGTGTGTCTTGCTGGACAAGAACTTTGAGCCAAAAATTTCCAACTTTGGCAAGGCAAAATTCCTAAACCAGACGGTTGAAGATCATGTGAGGATGAAATTGTTTTTGATTGATGGACTTGGAGTGAAGGGTTGTGCTGAGAGAGATGTCTATAACTTTGGAATAATCCTTTTTGAACTTTTAACAGGGAAAAGACTAAGTTCAACGACTGATTCTTCTGACAGTATTAATGGCCATTTGATGATGTATATCAGTGAGAACTTGTTCACTGATCCTGCTGACTTTTATGACGCCATTGACGATTCTATCATTGGGAAGGGTTTTGATGATAAAATCCGACGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTTTAAAGCAAAGGCCAAAGATGGTTGAAATGCACCAAACTATAAGAGCTATGTGGGAGAGCTACAAACCCTGA 1698 0.4152 MAGFGAESDVSCLQTIKNLDQVNLLSSWDFESNTEGGICRFSGVECSNHVEDRVIGLWLSNMGLKGQFPPCIEDFTWLQTLSLSHNELSGYIPNEMSAKLPYLATLDLSNNYFSGEIPKGIAHLSGLITLLLDGNQLTGQIPQDLGLLPWLRDFSVANNLLEGPVPVFVSNVNVSLSYANNSGLCGGILGTCDESLFGRSFWYSFIVGFVSSATSVIVSFMYYYAPWTELKKRRSNAIHPLIKKQNTRQEAELLPLTLREQGSKELSIWLERLVTRMSFTELCKATDYFCTDNVLGIGTTGITYKAKVSNNCFLAVKRLYDAERYRREFLLETMIPGRHRHRNIVPLHGFCIEKQERVLVYEYMSNGRLSDWLQSDEGHQPIKLEWPERIHIALGVARGLSWLHKRCKIVHLSLDSECVLLDKNFEPKISNFGKAKFLNQTVEDHVRMKLFLIDGLGVKGCAERDVYNFGIILFELLTGKRLSSTTDSSDSINGHLMMYISENLFTDPADFYDAIDDSIIGKGFDDKIRRLLEVACDCVKTSLKQRPKMVEMHQTIRAMWESYKP* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01150 565 Pfam Protein kinase domain 292 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01150 565 SUPERFAMILY Protein kinase-like (PK-like) 267 555 IPR011009 -
Lapu6g01150 565 Gene3D Phosphorylase Kinase; domain 1 252 363 - -
Lapu6g01150 565 Gene3D Ribonuclease Inhibitor 10 193 IPR032675 -
Lapu6g01150 565 SUPERFAMILY L domain-like 7 195 - -
Lapu6g01150 565 Pfam Leucine rich repeat N-terminal domain 7 47 IPR013210 -
Lapu6g01150 565 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 558 IPR046959 -
Lapu6g01150 565 Gene3D Transferase(Phosphotransferase) domain 1 364 564 - -
Lapu6g01150 565 FunFam Nuclear pore complex protein NUP107 6 167 - -
Lapu6g01150 565 ProSiteProfiles Protein kinase domain profile. 289 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01150 565 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01150 Lapu-Chr6 11430352 11432785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01150 7 561 Receptor kinase-like Gene Family AT3G28450 34.957 1.81e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lapu6g01150 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01150 - - gmx:106795644 919.457