Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01117 ATGATGTTCTTACTTCTTATGATTAGTTTTGCAAGCCCACTTTCATTTCGTTACCATGGATTTGAGTATGATGATGCCCGGATTGAAGGAGATGCTAGTTTGTCAGTGTCAGAAATCCAACTCACTAAAACCACAAGGTACCAAAGCAATGCTTACAGTGTTGGGAGAGTCACAAGTTTTGAGAGATTGCACCTGTGGGACATGAACACAGGAAAACTCACCGATTTCACTACCCAATTTTCCTTTGTCATTTTCTCTAATGAGACTAGTTTTGGAGATGGCTTGGCTTTTTTCTTTGCAGATCCCGAGCTCCCACTTTCCAATCAAATACAACAAGGAGGTGGTCTTGGTCTTCTGGATGGTAACCAACTATTGAAGTCAACTAAACATCCTTTTGTAGCAGTGGAGTTTGACACACACCAAAATTCATGGGATCCACCTGGCACTCATGTAGGTATAAATTTCAACTCTATGAGATCTAACAAAACTGTTCCATGGTACATTGATATTAGGCAAATGAAAGTTTATTATTGTGTAATTGAGTACAATGCAAGTACTCATAATTTAAATGTTTCTTTCACTGGAAACAAAGTCAATGGCAAGCCAATTAAAAGTTATATCTCATGCAATGTTGACCTGAGATATTACCTACCAGAGTGGGTTATATTTGGCTTCTCAGCTGCCACAGGAGTTATGTTTGAGTTGAACACACTGCAGTCATGGTCATTCCATTCGACTTTACAGAGTAATGAGAATGTGTCAAATAAGATACCTCCAATTGCAGCCTCACCAATCCTAAATCCTAGTCCTTCACCAATTTCCACTGATAATGTTAGCCCTAACCAAGAGGGAAAGAAGGGTTCATTGATGGCACTGGAAGTTGGGGTAGGCATAGCTGCAAGTTTCCTTATTTTAGGGTTGGTTTGTATTTTAATGTGGAAGAGGATGGCTAAAGGGAAGAAAGAAGATTCACTTCTTGATCTGAGCATGGATGATGAGTTCCGAAAGGGCATTGGACCGAAAAGGTTTTGCTATAAAGAATTGGCAAGTGCAACAAATAACTTTGCAGAGTCACAAAAGATTGGACAAGGTGGTTTTGGTGGTGTGTATAAAGGCTATTTGAAAGAGTTGAACTCCAACGTTGCTATAAAGAGGATATCAAGAGAATCTAGGCAAGGAGCAAAGGAATATGCCAGTGAAGTTAAGATCATCAGCCAACTAAGGCACAGGAATTTAGTGCAATTAATTGGTTGGTGCCATATGAAGAAAGATCTCCTCCTTATATATGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATCGTGGAAAAAGCATCTTGACATGGCAGATGAGGTACAGCATTGCCATGGACTTGGCTCTGGCAGTGTTGTACCTTCATGAAGAATGGGAGCAGTGTGTGGTTCATAGGGACATTAAATCCAGCAACATAATGTTGGATTCAAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGCTGGTTGATCATGAGAAAGGATCACAAACTACAATTCTAGCAGGGACAAGAGGCTACATAGCCCCTGAATACTTCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTTTTGGAGTTGTTTTACTGGAGTTAGCCACTGGAAGAAAACCGATTGACCTTAATGCCAAGGAAGGTCAAATAACCATATTTGAGTGGGTTTGGGAGCTCTATAAATTGGGAAAGTTACTTGAAGTGGTAGACACAAAGCTTGGTGGAGCATTTGATGAGGAACAAATGAAACATTTAGTGATCGGTGGCCTTTGGTGTGCCAATCCAGACTATACATCCAGGCCATCTGTAAGGCAATTGATTCAAGTGCTTAAGTTTGAAGCTCCTTTACCAGTTCTCCCACAAAAATTGCCTGAGCCAAATTATTATTCTCTAACTATGAGTACAATATTTGCTTCAATTTCTTCTCCTCTCTCCGGCTACATGTTAGAACCAAATACAATGTAA 2007 0.4011 MMFLLLMISFASPLSFRYHGFEYDDARIEGDASLSVSEIQLTKTTRYQSNAYSVGRVTSFERLHLWDMNTGKLTDFTTQFSFVIFSNETSFGDGLAFFFADPELPLSNQIQQGGGLGLLDGNQLLKSTKHPFVAVEFDTHQNSWDPPGTHVGINFNSMRSNKTVPWYIDIRQMKVYYCVIEYNASTHNLNVSFTGNKVNGKPIKSYISCNVDLRYYLPEWVIFGFSAATGVMFELNTLQSWSFHSTLQSNENVSNKIPPIAASPILNPSPSPISTDNVSPNQEGKKGSLMALEVGVGIAASFLILGLVCILMWKRMAKGKKEDSLLDLSMDDEFRKGIGPKRFCYKELASATNNFAESQKIGQGGFGGVYKGYLKELNSNVAIKRISRESRQGAKEYASEVKIISQLRHRNLVQLIGWCHMKKDLLLIYEFMQNGSLDSHLYRGKSILTWQMRYSIAMDLALAVLYLHEEWEQCVVHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTILAGTRGYIAPEYFTTGKARKESDIYSFGVVLLELATGRKPIDLNAKEGQITIFEWVWELYKLGKLLEVVDTKLGGAFDEEQMKHLVIGGLWCANPDYTSRPSVRQLIQVLKFEAPLPVLPQKLPEPNYYSLTMSTIFASISSPLSGYMLEPNTM* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01117 668 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Lapu6g01117 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Lapu6g01117 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 12 250 IPR013320 -
Lapu6g01117 668 FunFam L-type lectin-domain containing receptor kinase IX.1 12 256 - -
Lapu6g01117 668 PANTHER - 39 628 - -
Lapu6g01117 668 Gene3D Transferase(Phosphotransferase) domain 1 432 645 - -
Lapu6g01117 668 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Lapu6g01117 668 Pfam Legume lectin domain 14 253 IPR001220 GO:0030246
Lapu6g01117 668 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01117 668 ProSiteProfiles Protein kinase domain profile. 355 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01117 668 ProSitePatterns Legume lectins alpha-chain signature. 217 226 IPR000985 -
Lapu6g01117 668 Gene3D - 12 259 - -
Lapu6g01117 668 SUPERFAMILY Protein kinase-like (PK-like) 340 649 IPR011009 -
Lapu6g01117 668 MobiDBLite consensus disorder prediction 267 282 - -
Lapu6g01117 668 FunFam L-type lectin-domain containing receptor kinase IX.1 340 431 - -
Lapu6g01117 668 CDD STKc_IRAK 361 625 - -
Lapu6g01117 668 FunFam Lectin-domain containing receptor kinase A4.3 432 644 - -
Lapu6g01117 668 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01117 668 CDD lectin_legume_LecRK_Arcelin_ConA 14 247 IPR001220 GO:0030246
Lapu6g01117 668 MobiDBLite consensus disorder prediction 262 282 - -
Lapu6g01117 668 ProSitePatterns Legume lectins beta-chain signature. 133 139 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01117 Lapu-Chr6 11124872 11126938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01117 4 643 Receptor kinase-like Gene Family AT5G10530 44.410 1.38e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu6g01117 Pkinase 8.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01117 - - gmx:100814713 1094.72