Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01114 ATGGCAACTTCTCATTTATCAACACCTTCTCAGCTATTACCTACAAGACAACATAATCCCCCCAGGGTTCAGAATCTTATCGGGGGCAGTTTTCTGGACTCAAAATCGTTGACTCTCATTGATGTTATCAACCCTGCAACACAAGAGGTTGTTTTACAAGTTCCTTGCACCACAGATGAAGAGTTTAAAGCTGCAGTATCTGCTGCAAAGAAGGCATTTCCATCATGGCGAAACACTCCAATCACAAAACGCCAACGTGTTATGTTGAAATTCCAGGAGCTTATACGCAGAGATATAGATAAACTTGCACTGAATGTGACCACTGAACAAGGAAAGACGTTAAAGGATGCACAAGGGGACGTGTTCCGGGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGACAACTCTACAAATGGGAGAATATGTTTCCAATGTATCAAGTGGAATTGATACATATAGTATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCATTCAATTTTCCTGCCATGATTCCCTTGTGGATGTTTCCAGTGGCAGTTACCTGTGGCAATACCTTTATTCTAAAACCATCAGAGAAAGTTCCAGGTGTTTCTATAATGCTTGCAGACTTGGCAATGGAAGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGCGATGATGATGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCTAGAGCAGCTGCTAAAGGGAAACGTGTTCAGGCTAATATGGGGGCCAAAAATCATGCAGTTGTAATGCCTGATGCAAGTGTTGATGCTACTGTAAATGCTTTAGTTGCTGCAGGTTTTGGTGCTGCAGGACAAAGATGCATGGCTCTCAGCACTGTTGTTTTTGTTGGAAGCGCCGAATCATTGGAGAGTAAACTCGTGGAGCATGCCAAAGCTCTTAAAGTAAATTCTGGAACTGAACCTGATGCAGACCTCGGTCCGGTCATTAGCAAAGAGGCAAAGGAGCGAATTCACAGATTAATTAAATCTGGGGTTGACAGTGGTGCCAGACTAATACTCGATGGAAGAAATATAGTGGTACCAGGATATGAATGTGGCAATTTTATAGGCCCAACCATATTATCAGATGTCACTGCCAATATGGATTGCTACAAGGAGGAGATCTTTGGACCAGTTCTTCTTCTTATGGAGACTTATAGCTTGGAAGAGGCCATAAACATTATCAATGAGAACAAGTATGGAAACGGTGCCTCTATATTCACCACATCTGGTGTGGCTGCAAGGAAATTTCAGACTGGGATTGAGGCTGGACAGGTGGGCATCAATGTTCCTATTCCAGTTCCTTTGCCCTTTTTCTCTTTTACTGGCAACAAGGCATCATTTGCCGGCGATCTCAATTTCTATGGAAAAGCAGGGGTTAACTTTTATACACAGATCAAAACGGTGACCCAGCAATGGAAGGATTCAGCTACTGAGAGCAAGATTAATTTGGCTATGCCAACTTCTCAAAAATCTTGA 1557 0.4239 MATSHLSTPSQLLPTRQHNPPRVQNLIGGSFLDSKSLTLIDVINPATQEVVLQVPCTTDEEFKAAVSAAKKAFPSWRNTPITKRQRVMLKFQELIRRDIDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMTTLQMGEYVSNVSSGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKVPGVSIMLADLAMEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYARAAAKGKRVQANMGAKNHAVVMPDASVDATVNALVAAGFGAAGQRCMALSTVVFVGSAESLESKLVEHAKALKVNSGTEPDADLGPVISKEAKERIHRLIKSGVDSGARLILDGRNIVVPGYECGNFIGPTILSDVTANMDCYKEEIFGPVLLLMETYSLEEAINIINENKYGNGASIFTTSGVAARKFQTGIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSATESKINLAMPTSQKS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01114 518 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Lapu6g01114 518 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g01114 518 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 268 468 - -
Lapu6g01114 518 Pfam Aldehyde dehydrogenase family 33 495 IPR015590 GO:0016491
Lapu6g01114 518 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 23 499 IPR010061 GO:0004491
Lapu6g01114 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 42 476 IPR016162 GO:0016491
Lapu6g01114 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 468 IPR016163 GO:0016620
Lapu6g01114 518 CDD ALDH_F6_MMSDH 23 499 IPR010061 GO:0004491
Lapu6g01114 518 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 27 274 - -
Lapu6g01114 518 SUPERFAMILY ALDH-like 13 500 IPR016161 GO:0016491
Lapu6g01114 518 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 14 515 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01114 Lapu-Chr6 11100485 11108174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01114 1 483 Aldehyde Dehydrogenase Gene Family AT2G14170 80.165 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01114 K00140 - gmx:100783569 947.192