Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01070 ATGGATTGTTTCTGTTGCTTCAATCAGGTGGTTGGAGGACGCTCTTCATGTAACTCTGGCAAGGGCAGGAGCCATCTGTGCCCAGTTAAGTATGGTTTTAGCCTTGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATTGTTAAGTGCGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCCGCCTATTTACAAAAACATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCTTCCAGTTCTATCATTAAAGCTTATGAGACAACAGATCAAGCCATTCTTTCTCACAGTTCTGATTTGGGGAGAGGAGGATCGACTGCAGTGACTGCAATTCTTATTAATAATCACAAGTTATGGATAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGAAGGGGGTGGCCATACAAATCACTATTGATCATGAGCCAAATACTGAGAGGGGCTTCATTGAGAACAAAGGAGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGGGCATTCGGAGACAAAAATCTAAAATCACACCTACGATCTGATCCTGATGTACATCATGTTGATATTCACCCAGATGCTGAGCTTTTGATACTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAGAAGGATAAAAGATCCACAAAAGGCAGCCAAACAGCTAGTTGCGGAGGCATTGGACAAAGACAGCAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAAGGGTGA 840 0.4321 MDCFCCFNQVVGGRSSCNSGKGRSHLCPVKYGFSLVKGKANHPMEDYHVAKIVKCGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPSSSIIKAYETTDQAILSHSSDLGRGGSTAVTAILINNHKLWIANVGDSRAVLSRKGVAIQITIDHEPNTERGFIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVHHVDIHPDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLVAEALDKDSKDDISCIVVRFKG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01070 279 Gene3D - 25 279 IPR036457 -
Lapu6g01070 279 PANTHER PROTEIN PHOSPHATASE 25 277 IPR015655 GO:0004722|GO:0006470
Lapu6g01070 279 Pfam Protein phosphatase 2C 39 270 IPR001932 -
Lapu6g01070 279 FunFam Probable protein phosphatase 2C 39 22 278 - -
Lapu6g01070 279 CDD PP2Cc 29 277 IPR001932 -
Lapu6g01070 279 SMART PP2C_4 26 275 IPR001932 -
Lapu6g01070 279 SUPERFAMILY PP2C-like 23 278 IPR036457 -
Lapu6g01070 279 SMART PP2C_SIG_2 41 277 IPR001932 -
Lapu6g01070 279 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01070 Lapu-Chr6 10708368 10714218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01070 1 278 PP2C-type Phosphatase Gene Family AT1G22280 70.035 9.86e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01070 K17506 - gmx:100787659 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02855 3 51424926 51433697 Lapu6g01070 6 10708368 10714218 PCT