Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01069 ATGGCGGAGGGAGCTTCTTATGGATTGCGTCGTCCATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCAAATCACTTCAGAACCTCATAACAGGCCACCAAGTGGTTCACTTTTTCTATTCGATAGAAAGGTTTTGAGATACTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTCTTGCACTGCTACTATGCCCATGGAGAAGATAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTGTAGTAAATACTGAAGGTAATGAGGTCCTATCAGATTCCCAAAAGTTAACTTCTCCATCATCTAGTCTTCCCACACAACATAGCGGTGTTAGTTCACTTAGCACAGATTCTGTCAGCCCATCAACCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGAGGATATCCACCAAGCTAGTTCTGGGTTGCGCCCATTACATGAGTCACAACATATGGAAAATGGTCCATCGACAGAGAAGATTGATGCTGCTGGCTTGAACAGTTCATATCATATGCATCCCTTTTCAGGTGATCACGGACAGTCATCAATTTCTGGAACAGATTATATCCCAGTTGTTCATGGGGATAAATTTAGAGGAAATGACGCTGCTTATTTTGATGGTGAGAAAATAAATGACGTGGCACCATGGGACACTGTCTTGCAAAGCACTGCCAAATTGCATAATGATCCTTCCATCATTTCAATGGGTAATGTCCTTGAACAAGAACATACCATTTTCAGTCACCTTTTAACTGGCAAAAGAGATCTCACCGAGGAAGAAGAGAGCTCTCACTCTTTCCAATCGAGTTGGCAGATTCCTTTTGAGGACAATTCAAGAGACATGCCAATGTCAATCCAAACCCAATCATTTGGTCTGCAATTTGGATCTGATTATGACACCAGTTTACTAGGGTATGAAACTCGTAATGCAAGTTCTGAAATTGATCCGATCCTGTACAGTTTTCATGGTGATCCAAAAGAGCAGCTTATGCAGAAAAACTATCCACAAGAGCATGCAGATGGACAATCCCAACATGCTTTAAAATCCAATTCTGCAAATAAAGTTCCTGATGAAGAAACTATCGACTATGGCTTAACTGTGAAGCGCACATTATTGGACAAAGATGAGAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTTACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCGACACCTGGTATTTCATGGAGTACAGATGAATGCCAGCATGTGATAGACGATAGCTCCTTGAGCCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTCAGATATCGAGGTGTTGATTATTGGATCATTTTTGAAGAGTCAACCAGAGGTGAAAACATGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCGCGTCATAAAGTTGGGCGGGTCCCATTCTACGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGGGAATTCGATTTCAGAAAAGGCTTTGCTAGAAATGTAGATTTTGCAGATTTTTTTAGCAGTTCAACTGAAATGCTGCTTCATTTGCGACTGGAGAATTTTCTTACTTTAAAGCCAGTGGCCCCTTCAGATCATTCTTTTGAGGGTGATATGGAGAAAAGGAACTTAATTTTCAAGCTTATTTCACTGAGAGAGGAAGAGGAATATTCCATTAAGGACGAACCAACTACAGAATTGGATATATCCAAATACACGGTGAAGGAGCATCTTTTTCTCAGGCAGGTTAAAGAGAAGCTGTACTCATGGCTTCTTCACAAAGTAACTGAGAGTGGTAAAGGGCCAAATGTATTAGATGAGTATGGGCAAGGTGTGATACACTTAGCAGCTTTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAGTATCAACTTTCGAGATGTGAATGGATGGACAGCTCTTCACTGGGCTGCATTCTGTGGCAGAGAGCGGACAGTTGCTTTCCTGGTTTCCATGAGAGCAGATTGTGGAGCATTGACAGATCCATCCCCTGCATTTCCGTCAGGTCGAGCAGCTGCGGATCTGGCCTCTGCGAATGGGCACAAAGGAATCTCTGGTTTTCTTGCTGAGTGTTCATTAACTCGCCATCTTGAAACCCTCAAAATGGATGATCAAAAAGGCAGTCGGCAAGAAATTTCAGAAATGAAAGTGGTGCAGACAGTTTCAGAACGAACTGCGACACCTGTGCTCTCTGGTGATATGCCAGATGCACTCTGCCTCAAGGATTCGCTTACTGCTGTGCGTAATGCAACACAAGCCGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGTGACGATGAGCTTGGATTGTCAGATCAGCAAGCTCTATCTCTGCTTGCTTCTAGGACATGCAAATCTGGACAAGGAAATGGTTTAGCCAATGCGGCTGCAATACACATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGGCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTACGGAAACAGTATAAAACAATCATCTGGTCTGTGGGAATCCTAGAAAAGGTCATATTACGTTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGACAAGATGCGCTTAATAAAGTCCCCAGTCAACAAAATGATTCTCGGCAAGAGGATGATTATGATTATCTCAAGGAGGGACGGAAACAAAAGGAAGAAAAGATCCAAAAGGCCTTATCAAGGGTGAAATCCATGGCTCAGTATCCAGAGGCACGCGCCCAATACCGGCGTCTGCTAAATGTTGTCGAGGACTTCCGTCAAACCAAGGGAACTGACGAGGGTTTGACCAATTCTGAAGGGGCAGTTGATAGTGTGGAGGATTTGATTGATATTGATATGCTTTTAGACGATGATAATTTCATTCCTATAGCATTTAACTGA 3246 0.4202 MAEGASYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIVVNTEGNEVLSDSQKLTSPSSSLPTQHSGVSSLSTDSVSPSTSLMSLREDADSEDIHQASSGLRPLHESQHMENGPSTEKIDAAGLNSSYHMHPFSGDHGQSSISGTDYIPVVHGDKFRGNDAAYFDGEKINDVAPWDTVLQSTAKLHNDPSIISMGNVLEQEHTIFSHLLTGKRDLTEEEESSHSFQSSWQIPFEDNSRDMPMSIQTQSFGLQFGSDYDTSLLGYETRNASSEIDPILYSFHGDPKEQLMQKNYPQEHADGQSQHALKSNSANKVPDEETIDYGLTVKRTLLDKDESLKKVDSFSRWVTKELGEVADLNMQSTPGISWSTDECQHVIDDSSLSPSLSQDQLFSINDFSPKWAYAESDIEVLIIGSFLKSQPEVKTCNWSCMFGEVEVPAEVLADGILCCQAPRHKVGRVPFYVTCSNRLACSEVREFDFRKGFARNVDFADFFSSSTEMLLHLRLENFLTLKPVAPSDHSFEGDMEKRNLIFKLISLREEEEYSIKDEPTTELDISKYTVKEHLFLRQVKEKLYSWLLHKVTESGKGPNVLDEYGQGVIHLAAFLGYDWAINPIISAGVSINFRDVNGWTALHWAAFCGRERTVAFLVSMRADCGALTDPSPAFPSGRAAADLASANGHKGISGFLAECSLTRHLETLKMDDQKGSRQEISEMKVVQTVSERTATPVLSGDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTQYEGDDELGLSDQQALSLLASRTCKSGQGNGLANAAAIHIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKQYKTIIWSVGILEKVILRWRRKGSGLRGFRQDALNKVPSQQNDSRQEDDYDYLKEGRKQKEEKIQKALSRVKSMAQYPEARAQYRRLLNVVEDFRQTKGTDEGLTNSEGAVDSVEDLIDIDMLLDDDNFIPIAFN* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01069 1081 MobiDBLite consensus disorder prediction 153 223 - -
Lapu6g01069 1081 SUPERFAMILY Ankyrin repeat 684 791 IPR036770 -
Lapu6g01069 1081 SMART ANK_2a 729 758 IPR002110 GO:0005515
Lapu6g01069 1081 SMART ANK_2a 696 725 IPR002110 GO:0005515
Lapu6g01069 1081 Gene3D Immunoglobulins 489 584 IPR013783 -
Lapu6g01069 1081 Gene3D - 905 952 - -
Lapu6g01069 1081 ProSiteProfiles IQ motif profile. 905 934 IPR000048 GO:0005515
Lapu6g01069 1081 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1043 - -
Lapu6g01069 1081 FunFam Calmodulin-binding transcription activator 2 489 585 - -
Lapu6g01069 1081 Pfam IQ calmodulin-binding motif 907 925 IPR000048 GO:0005515
Lapu6g01069 1081 Pfam IQ calmodulin-binding motif 930 949 IPR000048 GO:0005515
Lapu6g01069 1081 Pfam IPT/TIG domain 496 570 IPR002909 -
Lapu6g01069 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 906 955 IPR027417 -
Lapu6g01069 1081 ProSiteProfiles IQ motif profile. 928 952 IPR000048 GO:0005515
Lapu6g01069 1081 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Lapu6g01069 1081 SUPERFAMILY E set domains 496 581 IPR014756 -
Lapu6g01069 1081 Gene3D - 664 801 IPR036770 -
Lapu6g01069 1081 ProSiteProfiles Ankyrin repeat profile. 729 761 IPR002110 GO:0005515
Lapu6g01069 1081 MobiDBLite consensus disorder prediction 153 188 - -
Lapu6g01069 1081 SMART iq_5 927 949 IPR000048 GO:0005515
Lapu6g01069 1081 SMART iq_5 904 926 IPR000048 GO:0005515
Lapu6g01069 1081 SMART CG_1_2 18 136 IPR005559 GO:0003677
Lapu6g01069 1081 MobiDBLite consensus disorder prediction 398 417 - -
Lapu6g01069 1081 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Lapu6g01069 1081 FunFam Calmodulin-binding transcription activator 2 904 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01069 Lapu-Chr6 10688502 10700339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01069 1 1062 CAMTA Transcription Factor Family AT5G64220 53.284 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lapu6g01069 CG-1 8.8e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01069 K21596 - gmx:100818124 1857.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02851 3 51393782 51404195 Lapu6g01069 6 10688502 10700339 PCT