Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01063 ATGAATATTTCATTTATTATCAATGTGGTTCTTCTGCTTGCAATTATATTGCTGTTGCTGCTTTACTACAACACATCCACAAAGCTGAATAAAATAGTGAAGGGGCAGATTCCCACTGTCATAGAAAAAGAGAATGACGTGGAGATCAGTGTTGACAAGAAGATAGAGATAGGAGAGGGGACAATGATTATGACAGTGGAAGAGAGAAAGGAACTGATGTTCTTTAATGATAAGCCAAAATTTCAAATGGGTGAACTTCTTAGAGCTTCTGCTGAGGCACTAGGTCATGGGATCTTGGGAAATAGTTATAAGGCTATGCTGAATAGTGGACATACCATTGTCGTAAAAAGGCTAAGGGACTTGAAACCATTCACCAAGGAGGAATTTGCGAAGGTATTAAATGTGATTGCTGAGATGAAGCACCCCAATTTGTTGCCCTTGCTTGCATACTACCATTCTAGAGATGAGAAGCTCATGCTTTACACGTATGCCGGGAATGGAAATCTTTTCTCCCGACTTCATGACGGTAGAGGTGGAAACCGGGCTCCTTTCAGTTGGAACTCAAGATTGTCAGTTGCAAGAGGAGTGGCTCGAGCATTGGTGTACCTGCACCTCAACCACAAGCTCCACAACATTGTCCCACACGGCAACTTGCGGTCTTCAAATGTACTATTCGATGAAAACGATGCGGTTCTTGTTTCTGACTTTGGTCTCGCCTCCTTGATAGCACAACCAATTGCAGCTCAGCACATGGTTGTTTACAAATCACCTGAATATGGGTATGCAAGAAAGGTGACAATGCAATCCGATGTGTGGAGCTATGGTTCACTTTTGATAGAGCTTCTAACCGGCAAAGTATCTATTAACTCAGCTCCACCAGGAACCAATGGGGTGGATCTATGCAGTTGGGTTCACAGAGCTGTGAGGGAAGAATGGACTGCAGAGATATTTGACAAAGAAATCTCTGGCCAAAAGAGTGCACTTCCTGGGATGCTGAGGTTGTTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCTGAGAAGCGTCCTGAGATGAGAGAGGTGATGAGAGAAGTGGAGAAAATACCGGCCCCGATTATCTCTGAAGATGGCGATGATGTGTCTGGGGATAGGTCCCTGACTGATGATTCCCTTTCAACCAGTACCTCCATCATTGGAGATGAAAGATAG 1191 0.4416 MNISFIINVVLLLAIILLLLLYYNTSTKLNKIVKGQIPTVIEKENDVEISVDKKIEIGEGTMIMTVEERKELMFFNDKPKFQMGELLRASAEALGHGILGNSYKAMLNSGHTIVVKRLRDLKPFTKEEFAKVLNVIAEMKHPNLLPLLAYYHSRDEKLMLYTYAGNGNLFSRLHDGRGGNRAPFSWNSRLSVARGVARALVYLHLNHKLHNIVPHGNLRSSNVLFDENDAVLVSDFGLASLIAQPIAAQHMVVYKSPEYGYARKVTMQSDVWSYGSLLIELLTGKVSINSAPPGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKSALPGMLRLLQIAMRCIERFPEKRPEMREVMREVEKIPAPIISEDGDDVSGDRSLTDDSLSTSTSIIGDER* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01063 396 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 363 IPR046959 -
Lapu6g01063 396 MobiDBLite consensus disorder prediction 363 379 - -
Lapu6g01063 396 MobiDBLite consensus disorder prediction 363 396 - -
Lapu6g01063 396 MobiDBLite consensus disorder prediction 380 396 - -
Lapu6g01063 396 Gene3D Transferase(Phosphotransferase) domain 1 165 373 - -
Lapu6g01063 396 Pfam Protein tyrosine and serine/threonine kinase 92 358 IPR001245 GO:0004672|GO:0006468
Lapu6g01063 396 SUPERFAMILY Protein kinase-like (PK-like) 92 362 IPR011009 -
Lapu6g01063 396 ProSiteProfiles Protein kinase domain profile. 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g01063 396 Gene3D Phosphorylase Kinase; domain 1 58 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01063 Lapu-Chr6 10630607 10632299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01063 53 388 Receptor kinase-like Gene Family AT2G36570 39.045 7.83e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu6g01063 PK_Tyr_Ser-Thr 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01063 - - vra:106774985 669.463