Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01062 TATTCTAGTACGTGTCCAGGTGCTGAATCCATTGTCACGTCCACAGTTGAGTCCTACGTTAGGTCTGACCCTACTTTGGCTGCTGGGATACTTAGGATGCACTTCCATGATTGCTTTGTGCGAGGTTGTGACGCTTCTGTTCTCATTGCTGGCTCTGGTACCGAGAGATCAGCAGGGCCAAACGTTAATCTGAGAGGATACGAGGTTATTGATGAAGCAAAGGAAAAGCTCGAGGCTCTCTGCCCTTCTGTTGTCTCCTGTGCTGATATCCTGGCTCTTGCTGCTCGTGATTCCGTTGTTCTGAGTGGTGGAAGAAGTTGGGAAGTGCCCACAGGACGCAAAGATGGAAGGGTTTCAATTGGAAGCGAAACCAGGAGTTTGCCTGCTGCTAATGATAGTGTGGCAGTGCAGAAGAATAAGTTTCATGATAAGGGTCTTAACACCCAAGACCTCGTCGTTCTTGCTGGTGGACACACAATAGGCACAACGGCTTGCCAATTTTTTGTAGACAGA 513 0.4854 YSSTCPGAESIVTSTVESYVRSDPTLAAGILRMHFHDCFVRGCDASVLIAGSGTERSAGPNVNLRGYEVIDEAKEKLEALCPSVVSCADILALAARDSVVLSGGRSWEVPTGRKDGRVSIGSETRSLPAANDSVAVQKNKFHDKGLNTQDLVVLAGGHTIGTTACQFFVDR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01062 171 ProSitePatterns Peroxidases active site signature. 27 38 IPR019794 GO:0004601
Lapu6g01062 171 Gene3D - 1 127 - -
Lapu6g01062 171 ProSitePatterns Peroxidases proximal heme-ligand signature. 150 160 IPR019793 -
Lapu6g01062 171 ProSiteProfiles Plant heme peroxidase family profile. 1 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 SUPERFAMILY Heme-dependent peroxidases 1 171 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 CDD secretory_peroxidase 1 171 IPR033905 GO:0004601|GO:0042744
Lapu6g01062 171 Gene3D Peroxidase, domain 2 128 171 - -
Lapu6g01062 171 FunFam Peroxidase 1 143 - -
Lapu6g01062 171 PRINTS Plant peroxidase signature 65 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Plant peroxidase signature 29 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Plant peroxidase signature 103 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Plant peroxidase signature 5 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Plant peroxidase signature 84 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Plant peroxidase signature 149 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PANTHER PEROXIDASE 25-RELATED 1 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 Pfam Peroxidase 13 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Haem peroxidase superfamily signature 27 41 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Haem peroxidase superfamily signature 150 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Haem peroxidase superfamily signature 103 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01062 171 PRINTS Haem peroxidase superfamily signature 85 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01062 Lapu-Chr6 10624661 10625707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01062 1 168 Peroxidase AT2G41480 68.452 1.44e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01062 K00430 - gmx:100789249 281.182