Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01061 ATGCACTTCCATGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTTCCGGTGCTAACACTGAGAAAACCGCATTTGCTAACCTTGGTTTAAGAGGATTTGAGGTTATTGATGATGCAAAGACACAGCTCGAGGCTGCATGCCCCGGTGTTGTGTCCTGTGCTGATATCCTTGCCCTTGCTGCTCGTGATTCCGTTGTTCTGAGTGGTGGACTGAGTTATCAGGTTCCTACTGGACGCAGAGATGGACGCATATCACAGGCTTCTGATGTGAGTAATTTGCCTGCTCCTTTTGACTCTGTTGATGTTCAGAAACAAAAGTTCGCAGCCAAGGGCCTCGACACTCAAGACCTCGTCACCCTTCTTGGTGCACATACCATTGGTACTACAGCTTGCCAGTTCTTCAGTAACAGATTATACAACTTCACTGCAAATGGTCCTGATCCTTCCATCGACCCTTCATTTCTTCCCCAACTACAATCACTATGCCCACAAAACGGCGACGGTTCAACCCGAGTTGCCCTAGACACGGGTAGTCAAAAAATATTTGATTTATCTTACTATAACAATTTGAGGAAAGGACGTGGAATTCTGCAGTCTGATCAAGCCCTTTGGAACGATGATTCCACACAGAAAATTGTGCAGAGGTACTTGGGCTTAATAAGAGGGTTGCTTGGGTTAAAATTCAACGTGGAATTTGGAAATTCTATGGTGAAGATGGGCAACATTGAGTTGAAGACTGGTACTGATGGAGAAATTCGCAAGATATGTTCTGCCATCAACTAG 789 0.4512 MHFHDCFVQGCDGSVLISGANTEKTAFANLGLRGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSYQVPTGRRDGRISQASDVSNLPAPFDSVDVQKQKFAAKGLDTQDLVTLLGAHTIGTTACQFFSNRLYNFTANGPDPSIDPSFLPQLQSLCPQNGDGSTRVALDTGSQKIFDLSYYNNLRKGRGILQSDQALWNDDSTQKIVQRYLGLIRGLLGLKFNVEFGNSMVKMGNIELKTGTDGEIRKICSAIN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01061 262 CDD secretory_peroxidase 1 261 IPR033905 GO:0004601|GO:0042744
Lapu6g01061 262 PRINTS Plant peroxidase signature 71 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 236 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 33 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 52 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Plant peroxidase signature 191 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 118 128 IPR019793 -
Lapu6g01061 262 Gene3D - 1 262 - -
Lapu6g01061 262 Gene3D Peroxidase, domain 2 96 241 - -
Lapu6g01061 262 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 PRINTS Haem peroxidase superfamily signature 53 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 ProSiteProfiles Plant heme peroxidase family profile. 1 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 Pfam Peroxidase 1 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 FunFam Peroxidase 96 241 - -
Lapu6g01061 262 PANTHER PEROXIDASE 25-RELATED 1 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu6g01061 262 SUPERFAMILY Heme-dependent peroxidases 1 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01061 Lapu-Chr6 10609998 10617190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01061 1 262 Peroxidase AT2G41480 66.920 2.54e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01061 K00430 - gmx:100820620 466.463