Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01055 ATGGATGTTCTAACAATAACCTCAACTCTTACCATTTCCAAACCATTTCATACGCTTCCGCTCCCGCAGAAACACCACACACCGCATCATCCTCGTACCCAGTTCGCAGTCTCATGCAGAGCCACGAAACAGCTTCGAGGTGTGGAAGATAACTTGTACAAGATTCTAAGTTTGAGTCCCAACAGTGCTACCACCGACGACATAAAGAAAGCGTATAGATCAATGGCTCGTCAGTACCACCCTGATGTGTGCCATGACGGTTCCAGGAAAGAGGAGTTGACGAGGATGTTTGTGCAGCTCAACGCTGCTTACACCACCTTGTCCAATCCCAGGCTTCGAGCAGAGTATGACTATGAACTGGGTTTGAGAAGCAGAATGAGCGTTGGCGACGAGAGTTGGAGAATGAGATGGTTGGAGCAACTGGCTGAGTTGAAGAGAAGATCTCACAAACGTATGCAACACAGTCATGGATCTTGGGGCACAAGAGTCAGAGCACAAAGCATGAACTGA 510 0.4824 MDVLTITSTLTISKPFHTLPLPQKHHTPHHPRTQFAVSCRATKQLRGVEDNLYKILSLSPNSATTDDIKKAYRSMARQYHPDVCHDGSRKEELTRMFVQLNAAYTTLSNPRLRAEYDYELGLRSRMSVGDESWRMRWLEQLAELKRRSHKRMQHSHGSWGTRVRAQSMN* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01055 169 CDD DnaJ 51 109 IPR001623 -
Lapu6g01055 169 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lapu6g01055 169 PRINTS DnaJ domain signature 92 112 IPR001623 -
Lapu6g01055 169 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lapu6g01055 169 SMART dnaj_3 50 112 IPR001623 -
Lapu6g01055 169 Pfam DnaJ domain 51 117 IPR001623 -
Lapu6g01055 169 Gene3D DnaJ domain 37 154 IPR036869 -
Lapu6g01055 169 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Lapu6g01055 169 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 32 168 - -
Lapu6g01055 169 SUPERFAMILY Chaperone J-domain 29 116 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01055 Lapu-Chr6 10584957 10585758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01055 53 117 C2H2 Transcription Factor Family AT1G74250 40.299 3.62e-06 44.3