Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01053 ATGGGAAGCTCAAGAGATATTGCCATTGGACCCGTGGCTGTAATTTCCCTCATGCTTGGAACTATGCTATCTGATGAGATAAGTGACTTCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCACTCAAATGGCTCTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTCTGTCTCATGCTGCCATTGTGGGATTCATGACTGGAGCTGCCATTACAATTGCACTGCAACAGCTGAAGGGTTTGCTAGGCATAAAAAACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCCACTTTCAGTTCAGCACACCATGGCGTAAGGTTTCATTTTGCCTTGAAATTCACTTTAAAATGGGGCTTGTATTCATTCGCTTCTAACCTTTGCTTGCAGTGGAATTGGGAGACAATAGTCATTGGATTAGCATTTTTGGTTTTCCTTCTTGTAGCCAAGTATATTGCCAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAACTTCTCCTATGATATCTGTCATAGTGTCTACCTTGTTTGTCTACATAACCAGAGCAGACAAGAAAGGGGTGGCAATTCTGAAACATGTTAAGAAGGGTGTGAATTCGTCATCTGCTAGTGAGATTTTTTTCAGTGGAAAATATTTAGGCCCTGGTATTCGGATTGGTGTGATAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGCAACCAAGAAATGATGGCAATGGGAGCAATGAACATTATTGGTTCTTTAACATCTTGTTATGTGTCTACAGGCGGTTTTTCTCGCACAGCAGTAAACAACATGGCTGGTTGTAAAACTGCAGGATCGAACATCGTTATGTCCATTGTTGTGTTAATGACTCTGCTACTCATTACGCCATTATTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCCGTGCTTGGCCTTGTGAACATTGAAGCTATTATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTCTTCATAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTGCCAAAATTCTTTTACAAGTGACAAGGCCAAGAACTGCAATATTAGGGAAGCTTCCAGGAACTACTGTTTATAGGAACGTCCTACAATACCCCAAAGCAACCCAAATTGATGGCATGCTGATTGTCAGGGTTGACTCAGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAGCTCAAAGGACAACAAGTGGAATGTCCAGAATAGAGTATCTCACTCTTGAGATGTCACCTGTTACTGATATTGACACAAGTGGAATTCATGCTTTTGAAGAGTTATTCAAGACCCTTCAAAAAAGAAAAGTCCAGCTTATCTTGGCAAACCCAGGGCCAATTGTGATAGAGAAGCTCCGTGCATCTAAGTTAACAGAAGTCATTGGAGAAAGTAACATATTTCTTACAGTGGCTGATGTTGTTTCAACTTTTGGTCCAAAGGGTGAAGGAGTATTATGA 1629 0.4119 MGSSRDIAIGPVAVISLMLGTMLSDEISDFKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMTGAAITIALQQLKGLLGIKNFTKKTDIVSVMRSTFSSAHHGVRFHFALKFTLKWGLYSFASNLCLQWNWETIVIGLAFLVFLLVAKYIAKKNKKLFWVAATSPMISVIVSTLFVYITRADKKGVAILKHVKKGVNSSSASEIFFSGKYLGPGIRIGVIAGMVALTEAVAIGRTFAAMKDYSLDGNQEMMAMGAMNIIGSLTSCYVSTGGFSRTAVNNMAGCKTAGSNIVMSIVVLMTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACMGALFGVVFISVEIGLLIAVAISFAKILLQVTRPRTAILGKLPGTTVYRNVLQYPKATQIDGMLIVRVDSAIYFSNSNYIKERILRWLSDEEAQRTTSGMSRIEYLTLEMSPVTDIDTSGIHAFEELFKTLQKRKVQLILANPGPIVIEKLRASKLTEVIGESNIFLTVADVVSTFGPKGEGVL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01053 542 FunFam Sulfate transporter 31 391 537 - -
Lapu6g01053 542 Pfam STAS domain 412 529 IPR002645 -
Lapu6g01053 542 CDD STAS_SulP_like_sulfate_transporter 412 527 - -
Lapu6g01053 542 PANTHER SULFATE TRANSPORTER 1 532 IPR001902 GO:0016020|GO:0055085
Lapu6g01053 542 Pfam Sulfate permease family 1 359 IPR011547 GO:0016020
Lapu6g01053 542 SUPERFAMILY SpoIIaa-like 413 535 IPR036513 -
Lapu6g01053 542 ProSiteProfiles STAS domain profile. 411 534 IPR002645 -
Lapu6g01053 542 Gene3D STAS domain 391 535 IPR036513 -
Lapu6g01053 542 NCBIfam sulfate permease 1 529 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01053 Lapu-Chr6 10568773 10571778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01053 1 537 Inorganic Solute Cotransporters AT1G22150 68.030 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01053 K17470 - gmx:100784124 881.322