Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01051 ATGAGTCAGCGTGTGAGTGACGAGGCAGTGACAAAGGCCATGGGGGAAATAAGAAGTGGGGCTTCTTCACGTAGGCATGGAGATACTTTGCCACACATTCACAAGGTGGGATCTCCTCCTAAGCAGACTCTTCTCCAAGAGATCAAACATTCTGTGCTTGAGACTTTCTTCCCAGACAAACCCTTCCACAAATTTAAAGACCAAACCGGCCTTAAAGTCTTTCTGTTAGGCCTGCAATCTCTCTTTCCCATTTTTGAATGGGGCAGAGATTACGATCTAAAAAAATTCCGAGGTGATTTCATCTCTGGACTCACCATTGCAAGTCTCTGTATCCCTCAGGACATTGCATACGCAAAGCTTGCGAATTTGGATCCCCAATATGCACTATACACTAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGACATATTGCCATCGGGCCCGTGGCTGTTGTGTCCCTCTTGCTTGGGACTCTGCTGACCGATGAGATCAGTGACTTCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCACTCAAATGGCACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGCTTAAGGGTCTGTTTGGCATAAAAGACTTCACTAAGAAAACTGATATTGTTTCTGTCCTGCGCTCGGTGTTTAAATCAGCACACCACGGGTGGAATTGGGAGACAATAGTCATTGGATTGGCATTTTTGGTTTTCCTTCTTGTAACCAAGTATATTGCTAAAAAGAATAAGAAGCTCTTTTGGGTGGCTGCAATTTCTCCTATGATATCTGTCATAGTGTCCACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGAGTGGCAATTGTGAAACATGTTAAGAAGGGTGTGAATCCATCATCTGCCAGCGAGATTTTTTTCAGCGGAAAATACCTAGGCCCCGGTATTCGGATTGGTGTGGTATCTGGTATGGTAGCTCTCACGGAAGCTGTTGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATGCACTGGATGGTAACAAAGAAATGATGGCAATGGGAGCAATGAACATGGTTGGTTCTCTAACATCTTGCTATGTGGCTACAGGCTCATTTTCTCGCTCAGCAGTGAACTACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCCATGGTCTTGTTATTGACTCTGCTACTCATTACGCCGCTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCTATTATAATAGCTGCCGTGCTTGGCCTTGTGAACATTGAAGCTATGATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCTTGTTTGGCGTGATTTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTGCCAAAATTCTTTTACAAGTGACAAGACCAAGAACTGCAGTACTAGGGAAGCTTCCAGGAACTACTATTTACAGGAACGTCCAGCAGTACCCCAAAGCAACCCAAATTAATGGCATGCTAATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAGCTCAAAGGACAACAAGTGGATTGTCCAGAATAGAGTATCTCACTGTTGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAGTTATACAAGAGCCTTCAGAAAAGAAAAGTCCAGCTTATCTTGGCAAACCCCGGGCCAATTGTAATGGAGAAGCTCCATGCATCAAAGTTAACAGACATAATTGGAGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTTCAACTTTTGGTCCAAAGGGTGAAGGAGAAGTATGA 1977 0.434 MSQRVSDEAVTKAMGEIRSGASSRRHGDTLPHIHKVGSPPKQTLLQEIKHSVLETFFPDKPFHKFKDQTGLKVFLLGLQSLFPIFEWGRDYDLKKFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVAPLVYAFMGSSRHIAIGPVAVVSLLLGTLLTDEISDFKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLFGIKDFTKKTDIVSVLRSVFKSAHHGWNWETIVIGLAFLVFLLVTKYIAKKNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVKHVKKGVNPSSASEIFFSGKYLGPGIRIGVVSGMVALTEAVAIGRTFAAMKDYALDGNKEMMAMGAMNMVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVLLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAMILLWKIDKFDFVACMGALFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTIYRNVQQYPKATQINGMLIVRVDSAIYFSNSNYIKERILRWLSDEEAQRTTSGLSRIEYLTVEMSPVTDIDTSGIHAFEELYKSLQKRKVQLILANPGPIVMEKLHASKLTDIIGEDKIFLTVGDAVSTFGPKGEGEV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01051 658 PANTHER SULFATE TRANSPORTER 46 648 IPR001902 GO:0016020|GO:0055085
Lapu6g01051 658 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
Lapu6g01051 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Lapu6g01051 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Lapu6g01051 658 FunFam Sulfate transporter 31 507 653 - -
Lapu6g01051 658 Pfam STAS domain 528 646 IPR002645 -
Lapu6g01051 658 Gene3D STAS domain 507 651 IPR036513 -
Lapu6g01051 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Lapu6g01051 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01051 Lapu-Chr6 10557673 10561250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01051 22 658 Inorganic Solute Cotransporters AT1G22150 71.630 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01051 K17470 - gmx:100784124 1161.75