Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01040 ATGGGAGATACCAATGTCAACCTTCCACCAGGCTTTCGATTCTATCCCACAGATGAAGAGCTTGTAGTCCATTTCCTTCACAGAAAAGCCTCACTTTTACCTTGCCACCCAGATGTCATCCCTGATCTTGAGCTCTACCAATATGATCCATGGGAACTTGATGGTAGAGCTTTGGCAGAGGGAAACCAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTCACTACCAATGGGTATTGGAAACCAACGGGAATGGAAGAACCAGTGGTTTCAAGCTCAAACAGCAAGAGAGTTGGCATGAAGAAATATTTTGTGTTTCAGGTAGGAGAAGCCGCTACTGGTATCAAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTGCTTCCTCTACCAGATCATCCAAAAGAAAACCTCAATCAAAAGCAGATTACAATAAATGGGTGATATGTCGTGTTTATGAGCGTAATGGAGAGGATGACAATGGAACAGAGCTCTCATGTTTGGATGAAGTATTCTTGTCATTGGATGATGATCTTGATGAAATAAGCTTACCAAATTAG 570 0.4158 MGDTNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLELYQYDPWELDGRALAEGNQWYYYSRRTQNRVTTNGYWKPTGMEEPVVSSSNSKRVGMKKYFVFQVGEAATGIKTNWIMQEYRLSDSASSTRSSKRKPQSKADYNKWVICRVYERNGEDDNGTELSCLDEVFLSLDDDLDEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01040 189 PANTHER NAC TRANSCRIPTION FACTOR 56 8 164 - -
Lapu6g01040 189 FunFam NAC domain-containing protein 104 17 161 - -
Lapu6g01040 189 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Lapu6g01040 189 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Lapu6g01040 189 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Lapu6g01040 189 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01040 Lapu-Chr6 10448601 10450264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01040 1 173 NAC Transcription Factor Family AT1G61110 42.188 2.07e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu6g01040 NAM 8.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01040 - - gmx:100793989 358.992