Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01032 ATGTTCATGGAGGTTCCCGATCACAACCCTTTCTCCATTTACTTAATTACTTCCATTGTCTCCCTTCTCTTCATCGTATTCAAACTAGTTCGAAGTTGGGGTTCCAACAACTCCTCTACCAATTTACCCCCAGGACCTAGGCCACTACCTCTCATAGGGAACTTACATCAGTTTATAGGTTTTCTGCCCCATCACTGCTTAAAAAATCTGGCAGATAAGTATGGGCCGTTGATGCACCTTAAACTAGGAGAGGTCTCCAACATCGTAGTTACTTCACCAGAGGTAGCCAAAGAGATTATGAAAACACACGATGTTAATTTTTGTGACAGGCCCAGCATTTTATCATCTACAATAGTTTCTTACAACTGTAGTAACATTGTCTTCTCTCAATATGGAGAATATTGGAGGCAAGTACGAAAGATATGCACAGTGGAGCTACTCACCACAAAGCGCGTGCAATCTTTTCGGTCCATAAGGGAAGAAGAGGTGGCAGATCTGGTAAAAAAAATAGCTGCAAGTGAAGGGAGGGTTATTAATCTCACCCAGAGCATTTTCCCAATGACTTATGGAATGGTGGCACGAGCGGCGTTTGGTAAAAAGAGCAGATATCAACAAGTGTTCATATCAAAGATCGAGGAGCAATTGAAGCTTATAGGAGGGTTTTCTGTTGCTGATCTCTATCCTTCTAGCAGAGTGCTTGCAACGATGGCGAAGGCGAAATTTGAGAAAGTTCACAGAGAGATTGATAGGATTTTGCAAGACATCATCGAAGAACACATAAATAGAAGCAGCTGCGACTGTGAAGCAGTGGAAGATTTGGTTGATGTTCTTCTCAAGTATCAACAGCAAAATCATTCCCAGGGTCACTTACACTTAACTGATGACAACGTTAAAGCTGTCATCCAGGACATATTCATCGGTGGAGGGGAAACTTCATCTTCTGTGGTGGAATGGGGGATGTCGGAACTGATAAGAAATCCAAGGGTGATGGAAAAAGCACAAGCTGAAGTGAGAAGAGTGTATGATGGGAAGGGATGCGTGGATGAGACAGAATTGCACCAGTTGACATACTTGAAGTCCATCATCAAAGAAACACTGAGGTTACACCCACCTGTACCATTGTTAGTTCCTAGAGAAAGTAGAGAAAGGTGCCAAATCAACGGATATGAGATACCCTCCAAGACTAGGGTAATTATCAATGCTTGGGCAATTGGAAGGAATCCTGAGTATTGGAGTGAAGCTGAGAGTTTTAAACCTGAGAGGTTTCTTAATAACTCCATTGATTTCAGAGGTACAGACTTTGAATTCATCCCATTTGGAGCTGGAAGAAGGATCTGCCCAGGCATCACCTTTGCCATCCCCAACATTGAGTTGCCACTTGCTCAGTTACTCTACCATTTTGATTGGAAGCTTCCCAACAAATTGAAGGATGAAGAACTTGACATGACCGAGTCAAGTGGAATTACTCTTCGAAGAAAAAATGACCTCTACTTGATTCCTATCACTCGTCAAACTTAA 1518 0.4242 MFMEVPDHNPFSIYLITSIVSLLFIVFKLVRSWGSNNSSTNLPPGPRPLPLIGNLHQFIGFLPHHCLKNLADKYGPLMHLKLGEVSNIVVTSPEVAKEIMKTHDVNFCDRPSILSSTIVSYNCSNIVFSQYGEYWRQVRKICTVELLTTKRVQSFRSIREEEVADLVKKIAASEGRVINLTQSIFPMTYGMVARAAFGKKSRYQQVFISKIEEQLKLIGGFSVADLYPSSRVLATMAKAKFEKVHREIDRILQDIIEEHINRSSCDCEAVEDLVDVLLKYQQQNHSQGHLHLTDDNVKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEKAQAEVRRVYDGKGCVDETELHQLTYLKSIIKETLRLHPPVPLLVPRESRERCQINGYEIPSKTRVIINAWAIGRNPEYWSEAESFKPERFLNNSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKLKDEELDMTESSGITLRRKNDLYLIPITRQT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01032 505 CDD CYP71-like 73 496 - -
Lapu6g01032 505 Gene3D Cytochrome P450 30 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Lapu6g01032 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 SUPERFAMILY Cytochrome P450 43 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 FunFam Cytochrome P450 71D8 35 500 - -
Lapu6g01032 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g01032 505 PANTHER OS08G0105600 PROTEIN 65 503 - -
Lapu6g01032 505 Pfam Cytochrome P450 43 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01032 Lapu-Chr6 10375226 10378796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01032 14 504 Cytochrome P450 AT5G25120 42.084 2.38e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01032 - - gmx:606548 771.926