Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01000 ATGAGTAGGACTGAATTATCGAGGGCGGTATCGAGGAAGCCACCGCGGGTTCCATTGGGGACACTGATTGGCCGTGAGATTCGAAATGGAAAAGTTGAAAAACCTTCCGTAAAGTACGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGTCTCAGGGTTCCTGGGGATGCATCAACAGCGTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGGATATCAGCTGCTATTTTTGCAAAAGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCCCAAGATATTAGCAGGGATGCATGGCTTCCGGCCCTTCCTCGCGCACTGGTTGTTGGCTTTGTGAAGACTGATATAGAGTTTCAGCAAAAGGGGGAAACTTCCGGAACAACAGCTACGTTCGTTTTGGTTGATGGATGGACTATAACTGTCGCATCTGTTGGGGATTCACGCTGCATATTAGATACTCAGGGAGGTGTTGTTTCTCTATTGACAGTTGATCACAGATTGGAAGAGAATGCAGAAGAAAGGGAGCGTGTGACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTTGGGCCTCTTCGCTGCTGGCCTGGTGGGTTGTGCCTATCTAGATCAATAGGTGACACAGACGTGGGGGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCCTCTGATGGTATCTGGGATGCTTTATCATCTGATATGGCTGCCAAGTCATGTCGCGGTCTACCTGCAGAGCTTGCTGCAAAACTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTCAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCTGTATTACCACCAACTCCAAGAAAGAAACATAATATGCTAACATCGCTTCTATTTTTTGGGAAAAAATCTGAGAACTCTGTGAACAAAGCTACCAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACTGAAAGGCTAGGTAAGGATTTTCCGCTTAATAAGAATTCCGGTATTTTCCGCTGTGCGGTTTGCCAAGTGGATCAACCCCCTGGTGATGGTTTGTCGGTGAATTCTGGACCTTTTTTTTCTCCAGCATCTAACCCTTGGGAAGGCCCATTCCTCTGCACAAACTGTCGGAAGAAGAAAGATGCCATGGAAGGAAAAAGGCCCAGCACCCCCACCGTTATAGCATAG 1299 0.4565 MSRTELSRAVSRKPPRVPLGTLIGREIRNGKVEKPSVKYGQAGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAIFDGHNGISAAIFAKENLLSNVLSAIPQDISRDAWLPALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPTPRKKHNMLTSLLFFGKKSENSVNKATNKLSAVGVVEELFEEGSAMLTERLGKDFPLNKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASNPWEGPFLCTNCRKKKDAMEGKRPSTPTVIA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01000 432 PANTHER PROTEIN PHOSPHATASE 49 299 IPR015655 GO:0004722|GO:0006470
Lapu6g01000 432 Pfam Protein phosphatase 2C 66 283 IPR001932 -
Lapu6g01000 432 CDD PP2Cc 46 300 IPR001932 -
Lapu6g01000 432 SUPERFAMILY PP2C-like 41 300 IPR036457 -
Lapu6g01000 432 Gene3D - 39 304 IPR036457 -
Lapu6g01000 432 SMART PP2C_SIG_2 53 300 IPR001932 -
Lapu6g01000 432 SMART PP2C_4 26 298 IPR001932 -
Lapu6g01000 432 FunFam probable protein phosphatase 2C 5 38 305 - -
Lapu6g01000 432 ProSiteProfiles PPM-type phosphatase domain profile. 31 300 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01000 Lapu-Chr6 10117175 10120601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01000 6 430 PP2C-type Phosphatase Gene Family AT1G09160 76.706 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01000 - - gmx:100807886 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01000 6 10117175 10120601 Lapu6g01000 6 10117175 10120601 ECH