Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00999 ATGGCAGCTGAACCACCTTTAACATTCTCTTTGGCTTCTGTGGTTGAAGAGGTTCTTCAACAGCATGCTGGTCGTTTCGACGTAAACTTGGCATCGAGAAAAACTGAAGAAACTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTACGGAAGACAGTTGGAGTTGTTCGAGGGAAAGACTTGCCAGCTGAGCCTTCTGAAGAAGACTTCAGGATTGGATTGCGTAGTGGGATTATCCTATGTAGTGTTCTTAACAAAATTCAACCTGGATCAGTGTCCATGGTAGTTGAAAAACCTCCTGATTCTGTTATTATTCCTGATGGATCAACATCTGCACATCAATACCTTCAAAATGTAAAGAATTTTCTTGTGGCCATGGATGAAATGGGGCTTCCTACCTTTGAAGTTTTTGATTTGGAACAGGGAGGAAATTCTTCGAGGATAGTGAATTGTGTTCTAGCCTTAAAGTCTTATGCCGAACGAAAACTTGTAGGAGGAAGTGGGGTTGGGAAATCTAGTGGGGTCACGAATGCAAAGCCACCTATCTCTGGGACACCACTTTTGAGGAAAAACTCAGAACCATTCATGAAGTCTATGTGTACTGTGCCATCAGGGGATAGAGATGGTTATATGAGTGATCCTGGACAAGATCGAAGCGAAAGGGGTTCTTTATCCTTAAATTCACTAGTTCGTCAGTATTTGTCCAACAAAAAGCCAGAAGAAATTCCCATTGCAGTGGAATCCTTGCTTAGCAAAGTCATGGAGGAATTTGAACATCAGATGCAAATCCGACATCAAATGTATAAAACAAATCAGGAAGATAAAGCACCATCTGAAGCAGAATGTTCAATTTCAGAAGCTGCTTCTATTAATGAAAGGGCGAAAGAAAAGGAAGATGAACATGATGTACAAGATGAACATGATGTACGAGATGAACATGATGTACGAGATGAACATGATGTACGAGATGAACATGATGTACGAGATGAACATAATGTACAAGCTGAGCATGACATTCAAGATGAACACAGCGAACAAAATAAACAAGAAAGTTATGAAGAGATGTGCAATGAGCAGGAAAAATCAAGCCACCAAATTTCGATTTTGAAGCAGCAAAATATAGTTGAGCAACAAAATAGAAGCATCCAGGAATTGAAAAACATTGTCCATCAAACAAAATTAGGAATGCAATTTATGCAAAATGAACACCAGAAGGAGATCATTTATCTAAGCAAGCACCTCCATAGCCTAACCTCTGCTGCTTCGGGATATCATAAAGTTCTTGAAGAAAACCGCAAGTTATATAATGTAGTGCAAGATTTGAAAGGAAATATTAGGGTATACTGCAGAGTCCGACCTTTCTTGGGTGGTCAACCAAGCCATTATAGCACTGTCGGTAACGTGGAAGAGGGAAGTATCTCAATCATAACACCTTCCAAATACGGTAAAGAGGGGAAGAAGACATTTAACTTCAATAGAGCATTTGGTCCTTCTGTAACCCAAGGAGAAGTTTTCTCGGACACACAACCTCTTATTCGGTCTGTTTTGGACGGTTACAATGTCTGCATATTTGCCTATGGCCAGACGGGATCAGGAAAAACATTCACTATGTCTGGGCCAGATGACCTTAACGATGAAACCATAGGTGTCAACTATCGTGCACTAGGAGACCTTTTCTATCTCTCTGAGCAAAGGAAAGATACAATTTCTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAACGAGCAAGTTAGGGACTTACTTACGACAGATGGAGCTAATAAAAGCATACGTTAG 1800 0.4039 MAAEPPLTFSLASVVEEVLQQHAGRFDVNLASRKTEETSLRRYEAAGWLRKTVGVVRGKDLPAEPSEEDFRIGLRSGIILCSVLNKIQPGSVSMVVEKPPDSVIIPDGSTSAHQYLQNVKNFLVAMDEMGLPTFEVFDLEQGGNSSRIVNCVLALKSYAERKLVGGSGVGKSSGVTNAKPPISGTPLLRKNSEPFMKSMCTVPSGDRDGYMSDPGQDRSERGSLSLNSLVRQYLSNKKPEEIPIAVESLLSKVMEEFEHQMQIRHQMYKTNQEDKAPSEAECSISEAASINERAKEKEDEHDVQDEHDVRDEHDVRDEHDVRDEHDVRDEHNVQAEHDIQDEHSEQNKQESYEEMCNEQEKSSHQISILKQQNIVEQQNRSIQELKNIVHQTKLGMQFMQNEHQKEIIYLSKHLHSLTSAASGYHKVLEENRKLYNVVQDLKGNIRVYCRVRPFLGGQPSHYSTVGNVEEGSISIITPSKYGKEGKKTFNFNRAFGPSVTQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLNDETIGVNYRALGDLFYLSEQRKDTISYEISVQMLEIYNEQVRDLLTTDGANKSIR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00999 599 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 386 598 - -
Lapu6g00999 599 Gene3D - 32 162 IPR036872 -
Lapu6g00999 599 SMART kinesin_4 442 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu6g00999 599 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 598 IPR027640 GO:0003777|GO:0007018
Lapu6g00999 599 Gene3D Kinesin motor domain 385 599 IPR036961 -
Lapu6g00999 599 MobiDBLite consensus disorder prediction 203 223 - -
Lapu6g00999 599 MobiDBLite consensus disorder prediction 291 360 - -
Lapu6g00999 599 SUPERFAMILY Calponin-homology domain, CH-domain 42 171 IPR036872 -
Lapu6g00999 599 ProSiteProfiles Calponin homology (CH) domain profile. 39 160 IPR001715 GO:0005515
Lapu6g00999 599 MobiDBLite consensus disorder prediction 170 190 - -
Lapu6g00999 599 CDD CH_AtKIN14-like 41 157 - -
Lapu6g00999 599 ProSiteProfiles Kinesin motor domain profile. 444 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu6g00999 599 Pfam Microtubule binding 430 589 IPR031852 GO:0008017
Lapu6g00999 599 SMART ch_5 41 158 IPR001715 GO:0005515
Lapu6g00999 599 MobiDBLite consensus disorder prediction 291 364 - -
Lapu6g00999 599 Pfam Calponin homology (CH) domain 42 160 IPR001715 GO:0005515
Lapu6g00999 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 597 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00999 Lapu-Chr6 10109388 10115285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00999 432 596 Calmodulin-binding Proteins AT5G65930 35.329 1.02e-27 117