LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu6g00993	ATGGAATCAAAAAGACAATCCCAGCAAGAGGGGGACGAAAGGGGTGATCAAAAGCGGAGACGTGAACGTCAAGATTCAAAACTATCGGAAACCTGCCGCATCATTGGAAGTTTTAGGTATCTGCCTCTCATTCGGAATGAACTGATACCGTACTTGGCAGATTTAGTTCGAAATTTGGTACGACAGGAGATGGAACGCCAAAGACCAATTAGTGTTCAAACTGAAATATCTGGAGCCTGCAGATGGTTGAAGCTGGTTTTTAGGAATGAATTGCCTGATACAATTCATACTTTCTCCAAGATCAAAGCTAGAGACAACACTCCTCTTGAGGTTGTTCTTTTTGATATTGAATCTGGGTCTATAGTGTCTGATGAAGATGATCCACTGTCTTCGATCAAGTTAGAGATGTGCGTCCTTGATGGTGAATTTGGTTCAGATGGCAGTGAAAATTGGAGTAAAGATGCATTCAACTCCAAAATCGTACGTCAAAGAGACCATAAAGGGCTGTTACTAAAAGGAAATACGATTATAGCTCTTAAAAATGGAGTCTGTTGTATTGATCAATTATCATTCACTGACAACTCATCTTGGTTGAGAATACGACGTTTCAGGTTAGGAGTGAAGGTTGTGAAATCAACTTTGAATGACGCAGTAAACATCAGGGAAGGTATAAGCAAACCTTTTATGGTCAAGGACTACAGAGTGAAGAAGAGACCAGATCCATTCCTCAATGATCAAATATGGCATTTGAAACATATATCAAAAAATGGGAAAACTTATGAGCAGCTGTCTAAGGACGGAATATACACTGTTGGGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGCAAGAGAAATTTATCAAGATTTCCAAAAAGAAACGGGAAGAAATTATTAAGCAGGCTAAGAAGGCAAAGCATGCTGAGACTGTTGCAGAAACCGTATTCGACAGACAAAATTATGAATCAGAGAATAATACTCTCAACTCCTATCAGAGGATTGAGCCACAACATGGCTTAGAGAAAACATTGACACAAGCTACTCAACAAGGTCTTCAACCGCAGGACTTCGCAATTGCTCAGCAAGAAGATATTTCTTGGCGAATGGACCCAAACTGGTCAGCAGAGGATTTTGTTGATGGAAACGTAGGGTTTGTTGGTTCATCATCACAGAATGATGAATTTGAAAGTAACTCTTATGCAATGTCAGAACCTCCCAATCATCATTCGTCTCTATCCAACTGTGCTTATACATCAAATAAAGGGAAAAGCAAATGGTTTGACATTATGTGA	1299	0.3965	MESKRQSQQEGDERGDQKRRRERQDSKLSETCRIIGSFRYLPLIRNELIPYLADLVRNLVRQEMERQRPISVQTEISGACRWLKLVFRNELPDTIHTFSKIKARDNTPLEVVLFDIESGSIVSDEDDPLSSIKLEMCVLDGEFGSDGSENWSKDAFNSKIVRQRDHKGLLLKGNTIIALKNGVCCIDQLSFTDNSSWLRIRRFRLGVKVVKSTLNDAVNIREGISKPFMVKDYRVKKRPDPFLNDQIWHLKHISKNGKTYEQLSKDGIYTVGDLLKEHETNPSSLQEKFIKISKKKREEIIKQAKKAKHAETVAETVFDRQNYESENNTLNSYQRIEPQHGLEKTLTQATQQGLQPQDFAIAQQEDISWRMDPNWSAEDFVDGNVGFVGSSSQNDEFESNSYAMSEPPNHHSSLSNCAYTSNKGKSKWFDIM*	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu6g00993	432	MobiDBLite	consensus disorder prediction	391	417	-	-
	Lapu6g00993	432	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lapu6g00993	432	Pfam	Calmodulin binding protein-like N-terminal domain	83	232	IPR046831	-
	Lapu6g00993	432	PANTHER	OS02G0177800 PROTEIN	19	387	IPR012416	GO:0005516
	Lapu6g00993	432	Pfam	Calmodulin binding protein central domain	243	306	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu6g00993	Lapu-Chr6	10070369	10073476	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu6g00993	3	287	Calmodulin-binding Proteins	AT5G62570	33.553	1.23e-40	147

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu6g00993	6	10070369	10073476	Lapu6g00993	6	10070369	10073476	ECH