Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00992 AGAGAGGGGATGGGACCATTGCTTAAAGGAGAAACAGTAATGAAAATTGTAAAAGGGGTCGGTTTTATCGGTAAGATTAAGATTACTGATATTTCCTTCCCCGCTGGAAACAAAACGTTTCGGTTGGGAGTTAAAATCGTGGGAATTAACCCCCTTGGAGCAGAAATCAGGGAAGCCAGAAGCGAACCCTTCAGGGTCAAGGATAAGCGTGGAGAGTCGATCAAGAAATCCGAGCGTCCATCCTTGAACGATGAGGTATGGCGTCTGAAGCACATACGAAAAGCGGGTGAGCTTCACAAGCAGCTTTCCCAGAAAGGAATCAAAACTGTGAAGGATCTTTTGAGGTTGAACGCAATCGGTTCATTACAGAAGAAATTCAGCAAGTTTAATAAATCATGGGACAGAATCATTGAACATGCTAAAGATTGTGAACTAAATTGTTATGAGCGCTACATCTATACGTATGAACCAGTGACATATGTTTCCCTTATCTTTAACTGCATCTATGAGCTTGTGGAGGTGATTTTTCATGGGCAACATCGTTCTCTGCAATCTCTGGATCCGGAAGAGAAGGGTTTGGTCGAAAGAATTAAACTGGAAGCATACTCAAATCCGCAGCATCTGCAGCCATATGAAACACAAACAGATGACATAGTCAGCAAGTCAACAGGTAAACAAGTGGCGTCATACAGTGCTCCATATCAAGTTCTGCAACTGCCTGCACACCAA 729 0.4307 REGMGPLLKGETVMKIVKGVGFIGKIKITDISFPAGNKTFRLGVKIVGINPLGAEIREARSEPFRVKDKRGESIKKSERPSLNDEVWRLKHIRKAGELHKQLSQKGIKTVKDLLRLNAIGSLQKKFSKFNKSWDRIIEHAKDCELNCYERYIYTYEPVTYVSLIFNCIYELVEVIFHGQHRSLQSLDPEEKGLVERIKLEAYSNPQHLQPYETQTDDIVSKSTGKQVASYSAPYQVLQLPAHQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00992 243 Pfam Calmodulin binding protein C-terminal domain 151 211 IPR046829 -
Lapu6g00992 243 Pfam Calmodulin binding protein-like N-terminal domain 1 69 IPR046831 -
Lapu6g00992 243 PANTHER OS02G0177800 PROTEIN 1 216 IPR012416 GO:0005516
Lapu6g00992 243 Pfam Calmodulin binding protein central domain 81 143 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00992 Lapu-Chr6 10065270 10066501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00992 1 204 Calmodulin-binding Proteins AT5G57580 41.827 1.98e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00992 - - vra:106757360 315.849