LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu6g00991	ATGGTATCAAAAAGGAAATCTCTTGAGAGACAACACAGTGGCGAAGTTCCAATTCGGGACCATAAACGGAGCTATGGTGATACAAAACAAGCGTCGATCAGTGGCCTGAGAAATGTGATCAACGCACTGTGGCTGAGTGACCACTCTTCCTATTTGGAAACTTTTGTGCGAAGAGTGGTAAGAGAGGAGGTGGAAAAAAAAATCCAGGACCAGTCTCATCTATTTCCAAGAAAAAAGGTTAATGGGGCTGGCATATCCGGAGCCAAACCCTTAAAGTTGTGTTTCCTTAATAAGTTACCTAATACAATTTATACTCGGTCTAATATAATGGCAGAAGACGAATCAGTCCTTCAAATTGCTCTAATTGATGTTAGAACTAAGTCTGTAGTAAAGGAGGGTCCTCTTTCCTCACTCAAGATAGAGATCTGTGTTCTGAATGGTGAGTTCGGATCTGATGGCAGTGAGGAGTGGACCGAAGACGAGTTCAATTCCAATATCTCACGTGAAAGAGAAGGTCGAGGGCCACTTTTGATTGGAGAGAGATTTGTTACTCTAAAAAATGGAGTTGCTAGTATCAATAAAATTGCCATATCTGACAACTCGAGATGGCAAAGAAACAGAAGGTTCAGGATTGGAGTTAAAGGTGTGCCACTAACCTCCAATGGAGAAAAGATTCAGGAGGGTAGGAGTGAACCTGTTATTGTCAAAGATAACAGAGGAGAGTGCTACAAGAAACACTACCCTCCATCCTTGGATGATGAATTATGGCGCTTGAAGAAAATAGCTAAGGAAGGACGAATCCACAAGCAATTTTCTTTACATGGAATTCACAACGTGAAGGATCTCTTGCGGCTGTACATAACTAACGAATCATCATATAAAATGTTTGGAAACATTTCAAAGAAGTTATGGTTAGCAATCACTGACCATGCCAAAACCTGTGTGATAGATGATTACAAGCTTTACAGCTATCACTCACAAGAACTGCAAATAGCCCTGCTATTCAATTCCATCTACATCCTCGTGGGAGTGACATTTGATTCGCGAAATTATTATTCACCAGATACTCTCACTCCCCAAGAAAAGCATTTGGTGGAAATAGTGAAGCAGGAAGCTTACAAAAATGTCAACAATTTGGAAATGATTGATGAAACTAAATTGAACTGTTTAAATCTAGCTGCATGTCTAAAAGCAAGACAGTCTGACACTCCAGATCAAGGTCTGCAATACATGGATATCTCAACTGCACAAGGTCAACCAGTAACATTCCCAGGTTATAGTCAACCATCTATCTCTGCTTCATATACTGATGAAGGAATGCATGATGACCATGTTTATGCCGATTCACTGCCAGGCACAAGAGAAATGCCACATAACAGTCATGTGTTGGATGAATTTTCCCCTGAGATGTACACTGAAGAGGATAGTTGTCACTTTAACGGATCGTGTTTCCCATTCATTGAAGGTGGATATTCAATAGAGAATGAAAGCTCAATGAATCCATTCATAGATGGTTGTCCTCCTTATGCAACATGGGAACCAAAAAGTGACATTATCTTTGGTTCTTCAGATGGAGAAGAATTTAGCAGTTATTCTAATTTTATAAATTCTTCTGTGGACTTATCAAGTAGTGGCAAACTCAAAGCAGCGTGGTGTAAGATTGGTTTTGCTCTCAAATGGGTCATATCAGTCAAAAGGCATGCAGCTGCCAAAAAGAATGCTCACCTGTGTTACCATAATTAA	1743	0.4005	MVSKRKSLERQHSGEVPIRDHKRSYGDTKQASISGLRNVINALWLSDHSSYLETFVRRVVREEVEKKIQDQSHLFPRKKVNGAGISGAKPLKLCFLNKLPNTIYTRSNIMAEDESVLQIALIDVRTKSVVKEGPLSSLKIEICVLNGEFGSDGSEEWTEDEFNSNISREREGRGPLLIGERFVTLKNGVASINKIAISDNSRWQRNRRFRIGVKGVPLTSNGEKIQEGRSEPVIVKDNRGECYKKHYPPSLDDELWRLKKIAKEGRIHKQFSLHGIHNVKDLLRLYITNESSYKMFGNISKKLWLAITDHAKTCVIDDYKLYSYHSQELQIALLFNSIYILVGVTFDSRNYYSPDTLTPQEKHLVEIVKQEAYKNVNNLEMIDETKLNCLNLAACLKARQSDTPDQGLQYMDISTAQGQPVTFPGYSQPSISASYTDEGMHDDHVYADSLPGTREMPHNSHVLDEFSPEMYTEEDSCHFNGSCFPFIEGGYSIENESSMNPFIDGCPPYATWEPKSDIIFGSSDGEEFSSYSNFINSSVDLSSSGKLKAAWCKIGFALKWVISVKRHAAAKKNAHLCYHN*	581

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu6g00991	580	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lapu6g00991	580	PANTHER	OS02G0177800 PROTEIN	45	445	IPR012416	GO:0005516
	Lapu6g00991	580	Pfam	Calmodulin binding protein-like N-terminal domain	91	238	IPR046831	-
	Lapu6g00991	580	Pfam	Calmodulin binding protein central domain	250	314	IPR046830	-
	Lapu6g00991	580	Pfam	Calmodulin binding protein C-terminal domain	320	380	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu6g00991	Lapu-Chr6	10056392	10059791	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu6g00991	50	580	Calmodulin-binding Proteins	AT4G25800	29.668	2.02e-79	260

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu6g00991	-		-	pvu:PHAVU_001G226000g	984.556