Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00990 ATGGAGATGGAGAAAAGGCGTTCGAAGGGAAGCTTCCTTAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTTTGGAGCGATCCTGAGGTTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACAGAAGTCACAGCTCACTAGGATAAAGGTGGACGAAATTGGAGCAAGTCCTAGTAACATTCAAAGTTGTGATTTTGACAGCACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCTCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCATTGCCAGCATCGGCAATCACTGAGCCCTCCTGCACCTCACTATACGGCTCTGCATCTCATGGAGTCTCTCACTGTAACGAGGGTGCTCTTCACTCAATGGATGAGTTTTTCCCTGCAGACTACGTAAACACAATGCTTAAGCTGGAGAAGTCTCACTTGGGTTCCATGGAGTCAAGGGCTAGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGCTGTCTCCTATCAAGAGTCCTGGTATGCTGCCACCAAAAAATGCTGCTCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAACCCTCGGCCATATTTGAGGAATAGAACAGCATCTGCTGGGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTGGAAGCTGCACAATATGCATCCGTGCCTGGAAGGCCTGTGAATATGAGCAAAATCTATCTTGCAAATGGCCAGCTTAGTGAGAGGAGTAGTAATTTGTCTAAATGCACTTCAGCATTCAAGGGTTCAGAAAAAAGTAGTTCTCACCATTTAGCCAGTAAAGGAAAACCAGTTTCACTTGCAATCCAAGCCAAAAACAACGCTCATAGTAGAGATACATTGATTTCAAATGGTGATATGAAATGCATGAGACAGAAAGAGAAGAATGAGGTAAAGTCAAATCAGCACTCAAGGAGCCAGAAACCAAGTTCACGAAAAGCCATGCAGCAGAGACCTTGCTCAAATCGGAATAGCAATGTGCTTGGGCAGAATAATCAGAAGCAAAATAGCATGACTTCCAAGGGTAAATCAACTTCAAAAATAGATTCCAATAAACCACCAACACATGCTGCATCTTCCGAGACTTTTGGAATAAGGAAGACAAAAAGCAAGGGTGCTATAACTGCCAATATTCAGCCTAAAAGATCAAGCACTAGGGCAACTGACACCCAAAAGGAGTTTCCAAGATCCAAATCAGTAAGTACTTCCCGAAAGACAAAGTATATTGGCAGTGATATTCATGAGGCTAGAGGTCCTGACAATACAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGAAGAAGTATGCCTGAGTCATCTTCCTCCACTGAGCTAGTTATCGGAACCAGAAATAGAATTGATGTAAACTCTCTTAGGCATTGCGATAATTTTTATCCCAAAAAATTGTCATTATCTCCACAAGGGAAACATATGATAGACAGTGATGCTTTAAATGTCCTGTTGGACAAAAAGCTGCAAGAATTGACATCTAGAATTAACTCACCTCAGTGTACTTTGGCCGCAGAGGGTAGTTCTTCTTGTTCGGGATCTAGTGTGCAAGGCAAAGTTCCCAGTGCGGCAAGCACCATCCCTAAGGAACAAGACAGAAGCCTTTTCCCTGACCTGTTTAGTGATAAACTGGACAGCATTCTTAATTCTCTTTCAAGTGATGATCCAGTGCATAGCATGAATCAACAACCGCAGACTTCAGAAGTAAATCAAGATCCTAGCTGTAGCAGCAAAAGCGAAAGTGAAAATGATTTAGTTTGTTGGCGTTCAATGTCTGTTGCGGGTTTTGAAACTCTTATCAGCGAAAGTTACATGGATAGTGAAGACAGTGCTTATGCCAGCACAATTTATTCTTCCATGCAAGATGAAGAAGTATCTAGTTTTTCCCAGATAAGCGAATGTATATCACTTGAAAGTGAGGTGAAAGGACCAGAGCAAAGCCCTTCCACATCGGGGGACGGAAATATGACTGTCAAACAAATAAGTGGAATATCAAATTTGATTGATTTTAAAGGATCAAGTAGCACAGAACTTGAATATGTACAGGATATTCTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTACAGTCATTATGCCAAATCTATTTGATCTGCTGGAAAATCAGAATAGTAGAACAGAAAGCTATGGAGAAGAGTACACTAAACTTGAAAGGAAGGTTATATTTGACTGTGTGAGCGAGTTCCTGGAGTTAAGATGTAAGCAAGCTTTCTTTGGAACGTGCAAAATGTGGCCTGGATGGATGATGTCAGTTCAGAGGAGGAACTGGATGGCAGAGGAACTGTACAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACCAAGGACATGAGCTCTGGAGGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATAGTAGCTTATTTGATTAATGAATTAGTTTCAGATTTGTTACCTGTTTAA 2727 0.4125 MEMEKRRSKGSFLSLFDWNSKSRKKLVWSDPEVSKQGKENVENLQKSQLTRIKVDEIGASPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDSLPASAITEPSCTSLYGSASHGVSHCNEGALHSMDEFFPADYVNTMLKLEKSHLGSMESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGMLPPKNAAHVMEAAAKIIEANPRPYLRNRTASAGPSSVPLRILNLKERLEAAQYASVPGRPVNMSKIYLANGQLSERSSNLSKCTSAFKGSEKSSSHHLASKGKPVSLAIQAKNNAHSRDTLISNGDMKCMRQKEKNEVKSNQHSRSQKPSSRKAMQQRPCSNRNSNVLGQNNQKQNSMTSKGKSTSKIDSNKPPTHAASSETFGIRKTKSKGAITANIQPKRSSTRATDTQKEFPRSKSVSTSRKTKYIGSDIHEARGPDNTVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESSSSTELVIGTRNRIDVNSLRHCDNFYPKKLSLSPQGKHMIDSDALNVLLDKKLQELTSRINSPQCTLAAEGSSSCSGSSVQGKVPSAASTIPKEQDRSLFPDLFSDKLDSILNSLSSDDPVHSMNQQPQTSEVNQDPSCSSKSESENDLVCWRSMSVAGFETLISESYMDSEDSAYASTIYSSMQDEEVSSFSQISECISLESEVKGPEQSPSTSGDGNMTVKQISGISNLIDFKGSSSTELEYVQDILGNAEFMAEEFAMGQTSTVIMPNLFDLLENQNSRTESYGEEYTKLERKVIFDCVSEFLELRCKQAFFGTCKMWPGWMMSVQRRNWMAEELYKEMLSFRSMEEVMVDELVTKDMSSGGGKWLDFDVEAFEEGLEVEGDIVAYLINELVSDLLPV* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00990 908 Pfam DUF761-associated sequence motif 77 102 IPR032795 -
Lapu6g00990 908 MobiDBLite consensus disorder prediction 330 443 - -
Lapu6g00990 908 MobiDBLite consensus disorder prediction 340 422 - -
Lapu6g00990 908 MobiDBLite consensus disorder prediction 577 599 - -
Lapu6g00990 908 Coils Coil 783 803 - -
Lapu6g00990 908 MobiDBLite consensus disorder prediction 622 651 - -
Lapu6g00990 908 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 904 - -
Lapu6g00990 908 Pfam Domain of unknown function (DUF4378) 748 900 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00990 Lapu-Chr6 10037185 10041919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00990 3 906 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.642 9.55e-110 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00990 - - gmx:102663635 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00990 6 10037185 10041919 Lapu6g00990 6 10037185 10041919 ECH