Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00982 ATGGTTTGCGAGGAAGAGTTGCTGATAGAAAAAGTCTGCGGGCTGTATGAACAGATCTCGAGCCTCGAGAGTCTGAAACCTTGCAAGAATGTCGACATGCTTTTCACCCAACTAGTCCTCACATGCATACCCCCTAGCCCAATCGATGTCACAAACCTAAACAAAAACGTGCAAGAGATTAGATCTCACCTTATAAAACTATGTGGTCAAGCTGAAGGCCATTTAGAGACTCACTACTCAACCCTCCTAGGCTCATACGACAACCCCCTTGAAAACCTTCATATTTTTCCTTATTATTCTAACTATCTCAAACTTGGTCTCCTTGAGTTCACTATCCTCACCCAACACTGCACCCATGACCCTAGCAAAATCGCCTTCGTGGGTTCTGGACCCCTTCCTCTCACCTCAATTGTGTTGGCATCAAACCACTTACCTTCCACCACTTTTCACAACTATGACTTGGACCCTTTAGCCAATTCCAATGCTATGCGCTTGGTTTCCTCTCACCCTGACTTGTCCAACCGCATGGTTTTTCACACCAGTGACATATTGGATGTGTCGAATGCTTTGAAGGAGTACGAGGTTGTTTACTTGGCAGCACTTGTGGGCATGGACAAGGAGGGGAAAAACCGAATCATCGATCACTTGGCCAAGCACATGAACCCTGGGGCACTTCTCATGCTAAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGAGCCTTGCGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACCGATGAGGTCATCAACTCGGTTGTCATAGCGCGTAAATATCCTGTCCCTATGCACTCACTTGATCAAGGCCTTGGTTCCAAGATCCTTCCCAACAAGTGTTCCGAGATTCAAGCCTTCAACCCCCTCAACCATGGGAACATCATTGAGGAATTGGCCATTGAGGAGCAACTCTTGTGA 954 0.4769 MVCEEELLIEKVCGLYEQISSLESLKPCKNVDMLFTQLVLTCIPPSPIDVTNLNKNVQEIRSHLIKLCGQAEGHLETHYSTLLGSYDNPLENLHIFPYYSNYLKLGLLEFTILTQHCTHDPSKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDLDPLANSNAMRLVSSHPDLSNRMVFHTSDILDVSNALKEYEVVYLAALVGMDKEGKNRIIDHLAKHMNPGALLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSVVIARKYPVPMHSLDQGLGSKILPNKCSEIQAFNPLNHGNIIEELAIEEQLL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00982 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Lapu6g00982 317 PANTHER NICOTIANAMINE SYNTHASE 3 4 311 IPR004298 GO:0030410|GO:0030418
Lapu6g00982 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Lapu6g00982 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 232 IPR029063 -
Lapu6g00982 317 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00982 Lapu-Chr6 9985401 9986849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00982 1 316 Nicotianamine Synthase Gene Family AT1G09240 61.994 4.88e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00982 K05953 - gmx:100794250 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00982 6 9985401 9986849 Lapu6g00982 6 9985401 9986849 ECH