Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00978 ATGGCGTCTCTCCACGCAAACCTCCATTCTGTTACGTCATCGCACCAATCCAATCGCAAGAAGCGCCGCAAACTCACGCACCACGCTTCCCTCGCTCCTGCTCCCTGGACTTCCCAAACCGAACACCGCGTCTACGCCTCCAACCTCCTCCACGCCCTCCGCCGTAACACCCCTTCCACCGCCCGCGATGTCCGCGCAGCCGCCGACCGCGCCCTCGCCGCCACTGCCAAAGGCCGAACTTGCTGGAGCCGCGCGATTCTCTCGAATCCGTTCGGCCGGTGGAAGCAGAGGCACCACAAGAAGGCCAGGAAGTCCGCGGCCGGATTGATTAAAAAGAAAACGCCGGAGATTCGAAGAACCGTGCCACCCCTGCAGAAGAAAGCGCGCGTTCTCGGACGGTTAATCCCCGGTTGCCGGAAGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGACTATATCTCTGCCTTGGAGATGCAAGTGCGAGCCATGACGTCTCTCGCCGACCTTCTAGCCGGCGGTCCGACGCCCCCCGGTCCGCTCCGTTTGAGTTGA 555 0.618 MASLHANLHSVTSSHQSNRKKRRKLTHHASLAPAPWTSQTEHRVYASNLLHALRRNTPSTARDVRAAADRALAATAKGRTCWSRAILSNPFGRWKQRHHKKARKSAAGLIKKKTPEIRRTVPPLQKKARVLGRLIPGCRKVSFPKLLEEAGDYISALEMQVRAMTSLADLLAGGPTPPGPLRLS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00978 184 MobiDBLite consensus disorder prediction 1 37 - -
Lapu6g00978 184 CDD bHLH_AtIBH1_like 118 168 IPR044549 GO:0006355
Lapu6g00978 184 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 171 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00978 Lapu-Chr6 9918259 9918813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00978 34 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 39.665 9.98e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00978 - - gmx:100813766 224.557