Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00952 ATGGACTATCGATGGACCAATGGTAGACAGGAAACCGGTGGCCGTGACAGGAGGCAATCTAAAAGGGATCAGGCATATCATGACTCTCTTATTGAGGATTTGTCAGAGGATTTCCGCTTGCCAATAAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCCCTGGAGACACAGTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAAGATGAACAAGGAATCACTGAGCCAATAAAATCTGGGATGAGAGATCCAAGACTGGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAAGAACATGTGAAGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGGAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGTCGAGATGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAGAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCGCAGAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGGAACAGTGTCCTCTGAGTCGAGAACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCGTCTAAAGGCAGTGCTTCCAAGATAACATTTGGTGCCAAGAAACAAAATGTTGCAAAGAAGCAAAATGTTCCAATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA 915 0.4175 MDYRWTNGRQETGGRDRRQSKRDQAYHDSLIEDLSEDFRLPINHRPTENVDLDNVEQASLETQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGMRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQRLQLQQESGSGTVSSESRTATALTDQEQRNTLKFGFSSKGSASKITFGAKKQNVAKKQNVPISSIFSNDSDEE* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00952 304 MobiDBLite consensus disorder prediction 85 106 - -
Lapu6g00952 304 MobiDBLite consensus disorder prediction 227 298 - -
Lapu6g00952 304 MobiDBLite consensus disorder prediction 192 222 - -
Lapu6g00952 304 SMART G-patch_5 64 109 IPR000467 GO:0003676
Lapu6g00952 304 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Lapu6g00952 304 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Lapu6g00952 304 MobiDBLite consensus disorder prediction 1 24 - -
Lapu6g00952 304 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Lapu6g00952 304 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 304 - -
Lapu6g00952 304 MobiDBLite consensus disorder prediction 192 304 - -
Lapu6g00952 304 MobiDBLite consensus disorder prediction 9 24 - -
Lapu6g00952 304 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Lapu6g00952 304 SUPERFAMILY beta-beta-alpha zinc fingers 149 189 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00952 1 304 C2H2 Transcription Factor Family AT5G26610 63.518 1.92e-124 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00952 - - gmx:100793206 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00952 6 9713993 9718032 Lapu6g00952 6 9713993 9718032 ECH