Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00929 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAAAGTGGGGTTGATTTGGAGTTCCTAGAGCCATTAGATGAAGGTTTAGGCCACTCTTTCTGTTATGTGAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCATCAAACTCTGAGAGGTTCACTGTTGATTCTAGCACCCTTGATTCTGAGACATTGAGTGGCTCATTTAGGCATGAGAGCATTGAAGAGAGGCCTGGCAAGAATGTTCCGGAAACCACATTCAAAACAATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCTGCATCCTTTGAGGGAACCTCGTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGTTCTGGACCTTTGAATGGATTCATGTCGGGACCATTGGAGAGATTTGCTTCCGGTCCATTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTTATGTCAGGACCTCTTGATGCTACTGACAAGTCCAACTTCTCAGCTCCCCTTGCACGTGGTCGCCGAAGGCCACACCTGCAGCGCCTGATGAGAAGTGTGAGTGGTCCTATGAGAAGTACTTTTTCTCGGACTTTTTCCAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGGTGGATCGTCCGAATTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGATAGAGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAACCTGAAGTCCTTAATAATGGAAATGGCGTAGTTGCTCTAGAATGCGGTAGGGAGGAAATGTCTGATGCTCATAACATTTCAAACGAAGAAAGTTCTCGCTGTTTAGAAACTTCTTGTCCAGTGATGGTCAATGATCAGTCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTAAGCTAAATGTTGAACAGCAAAATTGTGGAAGTCCCAGTGTTGACCTTCCTGTTCATGTATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGAAGTGTTCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTTTGGTTCCTGGGGAAATAACACAAGAAAGGCAGTTGAGGTTTTGCTCATCTGATGGTAAAGAGGATAGATCTGGACACCAGGATGAATGTCCAACTACTTCAGGGGAAAATGGTGGCCCTGGGTTTAATTCGACTAACCAAGAGCCAATAGCTCCCTTTTCTGTTTCAGGTCAAAGGAAGAATACTAGAAAGTCATTTATTAGTACAAAAATCAGAAAAATGTACGGGAAACAAAAGTCCTTACGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAGGAGGCGTACTTGAACATGGTGGAGAATAATATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTTATGAACCTCGGAGATAGTCGTGCAATTTTGGCTCAAGAGCGACCAAATGATCGTTATCCTAATCCGTGTCTCATCAAAGATGACATGAGGCATAGGAATCGATCTAGAGAGTCACTAGTGGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATAAACAAGCATGTTAATAAGATAAACAAAAACCGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACAGATCACAGCACAAGTATAGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAACCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATGTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGCAATGGTCCTTACCTAAGTTGCACTTCTTCTGTTGTTCATCACCGGCTTTCTTCAAGCGATCGGTTCCTGGTGCTGTCCTCTGACGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATTGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAGCTTCTCTTCCGTGCCGCAAAAAAAAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGTAAATATCATGATGATGTTTCTGTTATGGTCGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2664 0.4336 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRSTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEGGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPEVLNNGNGVVALECGREEMSDAHNISNEESSRCLETSCPVMVNDQSSNSEIVEVNAEIKLNVEQQNCGSPSVDLPVHVSVPIGQLSGQGRRSVRLYELLQMESWNEQVSEQGKDSLVPGEITQERQLRFCSSDGKEDRSGHQDECPTTSGENGGPGFNSTNQEPIAPFSVSGQRKNTRKSFISTKIRKMYGKQKSLRKKLFPWSYDWHREETCFDKKLVESSGPIRICKSGVDHNAVLRAMARALERTEEAYLNMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRYPNPCLIKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCFNEPLLKMFRVDYVGNGPYLSCTSSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFIENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00929 887 CDD PP2Cc 584 878 IPR001932 -
Lapu6g00929 887 Gene3D - 516 884 IPR036457 -
Lapu6g00929 887 Gene3D - 245 416 IPR036457 -
Lapu6g00929 887 PANTHER PROTEIN PHOSPHATASE 2C 273 877 IPR015655 GO:0004722|GO:0006470
Lapu6g00929 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Lapu6g00929 887 Pfam Protein phosphatase 2C 598 646 IPR001932 -
Lapu6g00929 887 MobiDBLite consensus disorder prediction 492 524 - -
Lapu6g00929 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Lapu6g00929 887 FunFam Protein phosphatase 2C 32 248 416 - -
Lapu6g00929 887 SMART PP2C_4 271 876 IPR001932 -
Lapu6g00929 887 MobiDBLite consensus disorder prediction 478 524 - -
Lapu6g00929 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00929 Lapu-Chr6 9475879 9482700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00929 1 887 PP2C-type Phosphatase Gene Family AT2G46920 64.556 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00929 - - gmx:100786856 1676.37