Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00926 ATGAGAATGAAACTGTTCCTTCTAATAGCATTTACCTTTCTTTCTGTGGTTATCAACGTTAGATCTGAGTCTGAGCTTTTGTTCCAAAACGATGCCATTTCAATAGCTGCAAAACCTCTATTGGTCCCTCTCACTCTTATTCACGGAGCTGCTTCCGTAGGAGCTGTTTGTTTGGATGGAACGTTGCCTGGTTACCACTTTCATCCAGGATTTGGATCTGGGGCAAATAGCTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTCAGAAAAACTACTCGTCGTGGTTCCTCAAAATTCATGGAAAAGCAACTACCATTCACTGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGGGTTAAAGTACGGTACTGTGATGGAGCATCTTTCAGCGGAGATAGTGAAAACGTGGCTGCAAAGCTTCAATTCCGAGGACAAAAAATCTGGCAAGCTGCAATGGAGGAATTATTGTCAAAGGGAATGAAGAAGGCCAAGCAGGCCCTTTTGTCTGGATGCTCTGCTGGTGGTCTAGCATCTATAGTACATTGTGATGAGTTCCGGACCTTGTTTCCTTCATCTACCAAAGTAAAATGTTTGAGTGATGCAGGGCTTTTCCTAGATGCGGTTGATGTTTCTGGGGCTCGCACAATGAGGAATTTCTTTGGAGGTGTAGTTAAATTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTCAACCAATTGGACCCAACTTCGTGCTTTTTTCCTCAGAATTTGGTCAACCATGTTGAGACTCCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGTCCCTCCTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAACATAATCTCGAGCACTGTAACTCATCTCAAATTCAGTTCTTCCAAGACTTCAGAAATCAAATGCTAAACTACATCAAAGGCTTCTCAGGGGAATCTCAAACTGGGTTATTCATCAATTCTTGTTTTGCTCATTGCCAGACTGAGTTACAAGATACTTGGTTTGCGGATAATTCTCCAATTATGGGCAACATGCCAATTGCAATTGCTGTTGGAGACTGGTATTTCGATCGGAAAACTGTCAAAGCTATAGACTGTGCTTACCCCTGTGACAAAACCTGCCATAATCTGGTCTTCAAAGCTGGTAGATCTACTGCGGTGGACTACCAGTCCTCAAGTGGTGATGACACATCTACCATGACCATGACATATTCTCGCTCCACGAGGCTGACTTATAGTGCTGGCCTATATATGCTAAGTGTTCTATTGCTAATTACTTACGCCTAG 1362 0.4266 MRMKLFLLIAFTFLSVVINVRSESELLFQNDAISIAAKPLLVPLTLIHGAASVGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKFMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSENVAAKLQFRGQKIWQAAMEELLSKGMKKAKQALLSGCSAGGLASIVHCDEFRTLFPSSTKVKCLSDAGLFLDAVDVSGARTMRNFFGGVVKLQEVQKNLPKSCLNQLDPTSCFFPQNLVNHVETPLFLLNAAYDAWQVQESLVPPSADPHGSWNDCKHNLEHCNSSQIQFFQDFRNQMLNYIKGFSGESQTGLFINSCFAHCQTELQDTWFADNSPIMGNMPIAIAVGDWYFDRKTVKAIDCAYPCDKTCHNLVFKAGRSTAVDYQSSSGDDTSTMTMTYSRSTRLTYSAGLYMLSVLLLITYA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00926 453 Pfam Pectinacetylesterase 37 385 IPR004963 GO:0016787
Lapu6g00926 453 PANTHER NOTUM-RELATED 30 401 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00926 Lapu-Chr6 9445263 9450790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00926 29 405 Carbohydrate Esterase AT1G57590 70.822 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00926 K19882 - gmx:100785270 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00926 6 9445263 9450790 Lapu7g00495 7 5594119 5599055 PCT