Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00920 ATGGGAAAACACTCTAGTTCTTCCTCCTCCTCTATCAGCAGCAGCAACAGCAACCGCCACCACCTTCTCATTTCAACTGCATCCTCTCTCACGCAAGAACTTCCCACTGATCTTAGCCTTGGACTCAGCATTTCCGCCACTCATCATGTTGGCTCTTCTATTTCAAGGGGGCATTGGCAACAACCACATCACCCTCTTGTGAACATTTCACAAGGCGCTGAAGTGAATGATTGCAACGATCATAGCAGCTTCTTTGTGAAGGTCTACATGGAAGGCATTCCAATAGGAAGGAAACTCAATATACTTGCTCATGGAGGCTATTATGAGTTAGTGAAGACTCTTGAACACATGTTCGACACCACCATTCTTTGGGGGACAGAGATGAATGGAGTGCAACCTGAGAGATGTCATGTGCTAACATACGAAGACGAAGAAGGGGATTTGGTCATGGATGTTCTTATCCACAGTAAAGAGATTGAAGATCACAAGGGTAGACACATTCGGGTGTTAAGTGTGCACACACTACCAGATATTTCCAATTTTGTCCTCTAG 552 0.4511 MGKHSSSSSSSISSSNSNRHHLLISTASSLTQELPTDLSLGLSISATHHVGSSISRGHWQQPHHPLVNISQGAEVNDCNDHSSFFVKVYMEGIPIGRKLNILAHGGYYELVKTLEHMFDTTILWGTEMNGVQPERCHVLTYEDEEGDLVMDVLIHSKEIEDHKGRHIRVLSVHTLPDISNFVL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00920 183 ProSiteProfiles PB1 domain profile. 83 174 IPR000270 GO:0005515
Lapu6g00920 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 76 150 IPR003311 GO:0005634|GO:0006355
Lapu6g00920 183 Gene3D - 77 168 - -
Lapu6g00920 183 Pfam AUX/IAA family 76 149 IPR033389 -
Lapu6g00920 183 SUPERFAMILY CAD & PB1 domains 78 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00920 Lapu-Chr6 9360630 9361561 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu6g00920 AUX_IAA 1.4e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00920 K14484 - gmx:100818376 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00920 6 9360630 9361561 Lapu7g00501 7 5667350 5668443 PCT