Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00912 ATGGCATTGTCTGTGATAAGAACAAAACGAGGCCTAGTTAAGCCAAGCGAGAAGACTCCCTTGATCACACTAGATTTATCAGTGATTGACAGGTTACCTGTTCTAAGATGCAATGCTAGAACCTTGCATGTGTTCAAACACGGTCCTCAAGCAACAAGGGTTATAAGGGAGGCCCTCTCCAAAGCACTGGTTCCATATTACCCTCTTGCGGGAAGACTCAAAGAATCGCAACTGGGGTGCCTTCAAATTGAGTGCTCAGGTGATGGCGTGTGGTATGTTGAGGCATCTTCTGATTGCACCCTTCACTCTCTCAGTTTCTTTGATGATGTTCAGTCTATTCCTTATGATGATCTTCTTCCTGATGCTATTCCCCAGAGCCAAGGCATCGATCCCCTCGTCCAAATGCAGGTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAGTAGGGGAACTAGCTAGGGATTTAGAGAAACCTACCATTGAACCAGTGTGGCACAGGAACTTCTTTCCATCTTCTCAAACCCCTCAAGAAACTGCATTGCCACCAATACCACTCGCTCCTCCTCAAATGCCAGAATACAAACTAGAGCATGCTAACATAGACATGCCCATGGATCAAATCAACCGTCTGAAAAGAGAATTTCAACGAGTGACTGGACTCAACTGCTCAACCTTCGAGATTGTGGCAGCATCATGTTGGACCACTCGTACAAGGGCCATTGAATTCGAGCCCAATACGGAACTGAAGCTAGTGTTCTTTGCAAATTGCCGTCAACTATTGGACCCTGCTCTGCCCGATGGCTTCTACGGCAATTGCTTCTTCCCAGTGACGATCACTGCTTCGTGTGAGTCACTAAGAAGTGCAACAATGGTTGGTGTGGTGAAGCTGATACAAGAAGCGAAGGCCAAGTTAGGCGTGGAATTTGAGAAGTACTTGAAGGGTGAGCATCTGAAAAATGGAGAAGACCCCTTTGCGCCTCCACTCACCTACACCACTCTCTTCGTATCAGAGTGGGGGAGGCTGGGATTCAACCACGTGGACTACCAGTGGGGCCCACCCGTCCACGTGGTTCCCATACAGGGCTCTAGCATTATACCAGTGGCCATTGTGGGGTCCATGCCTCTTCCCAACAAAGGCATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGTCTTCCTTTCCTTCATCAGATGCATGGGGTCGTGAATCAGGAACTGAACGTGTAA 1290 0.4837 MALSVIRTKRGLVKPSEKTPLITLDLSVIDRLPVLRCNARTLHVFKHGPQATRVIREALSKALVPYYPLAGRLKESQLGCLQIECSGDGVWYVEASSDCTLHSLSFFDDVQSIPYDDLLPDAIPQSQGIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAVGELARDLEKPTIEPVWHRNFFPSSQTPQETALPPIPLAPPQMPEYKLEHANIDMPMDQINRLKREFQRVTGLNCSTFEIVAASCWTTRTRAIEFEPNTELKLVFFANCRQLLDPALPDGFYGNCFFPVTITASCESLRSATMVGVVKLIQEAKAKLGVEFEKYLKGEHLKNGEDPFAPPLTYTTLFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPNKGIRLMTWCVEEAHRLPFLHQMHGVVNQELNV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00912 429 Gene3D - 202 413 IPR023213 -
Lapu6g00912 429 Gene3D - 2 201 IPR023213 -
Lapu6g00912 429 PANTHER ACYL TRANSFERASE 4 3 421 - -
Lapu6g00912 429 Pfam Transferase family 5 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00912 Lapu-Chr6 9282216 9284596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00912 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.678 2.19e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00912 - - gmx:100783128 739.954