Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00911 ATGAGCGAGAGAGTAACAATAATGAAATCAAAAATTGGCATAAACCATTCTCAGAGACCTTACCATCTAAATCTCTCCACGCACACCAATCTCCTCTCCTCTCCTCTCATCATCTCTATGTTCTCTTTTCTTCTTTTGTTTTCTGCAATGGAGGACGAGCCTTTTCTCACAACCACCACCACTTCCCAACGCGCCGATTTCCACCTGCAATCTTCCAAATCCTTCGATGACGTCACCGCTCCACGCGCCGCGCGTGACGCCGAGATTCAAGAACACCACCTCCAATCCTCCCCCTTTCACCCCAAGAAGAAAAAACTCAGTCGCTGCAAAACAGCACCCGCCATGGTTACCATGCGTGACCTCAAACCTAAGACGCCCCAAGTCCCCAAGCCTCAGTCCAGTTCCATAATCCGACAAGGCATGTGCTTACTCGCCATGTACCTCTGTGTCGGAGTCGCCATTTACTCTTTCAACAGGGACCGTTTCTCCGGCATCGAGACCCACCCTGTGGTCGATGCCCTTTACTTTTGTATAGTTACCATGTGTACCATAGGTTACGGTGACATCGCTCCCTTGACCCCACTTACAAAGGTCTTTGCTTGCGTCTTCGTGCTGGTGGGGTTCGGCTTTATAGACATACTCCTCAGTGGCCTTGTTAACTTTGTTTTGGATGTGCAAGAGAACATGATCCTTACGGGGCTCCAAATGGGTGCAACTGCCAGGGAGGGTTTTTCTGCCAGGAACTACATCGTTGATGTGGTGAAGGGGAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCACTTGGGGTTGTTGTGCTGTGTATTGGTATTGGGAGTTTGGTCTTGTGCTTTGTGGAGGGTTTGGATTGGGTTGATTCTATTTACTTGTCTGTTATGTCTGTCACAACGGTTGGGTACGGGGACAGGGCCTTTAAGACTCTTCCCGGTCGGTTATTTGCTGCTATTTGGTTGCTTTTTTCTACTTTGATGGTGGCACGGGCTTTCCTCTATCTGACAGAGGCCAGAATTAATAGAAGGCATCGCAGAATGGCCCAGAAGGTGTTGCAAAGAGAAATCACCGTTGAGGATTTGCTTGCTGCTGATATCAACCACACTGGTTTCATCAGCAAGTCAGAGTATGTAATCTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTGTTGCAAATTTGTGACCAATTCATGAAGCTTGACCCCTCTAACTGTGGAAAGATAACACTACCTCATCTCTTGGGGGGTACTTTATGA 1275 0.4776 MSERVTIMKSKIGINHSQRPYHLNLSTHTNLLSSPLIISMFSFLLLFSAMEDEPFLTTTTTSQRADFHLQSSKSFDDVTAPRAARDAEIQEHHLQSSPFHPKKKKLSRCKTAPAMVTMRDLKPKTPQVPKPQSSSIIRQGMCLLAMYLCVGVAIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPLTKVFACVFVLVGFGFIDILLSGLVNFVLDVQENMILTGLQMGATAREGFSARNYIVDVVKGRMRIRLKVGLALGVVVLCIGIGSLVLCFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLTEARINRRHRRMAQKVLQREITVEDLLAADINHTGFISKSEYVIFKLKEMGKIQEKDVLQICDQFMKLDPSNCGKITLPHLLGGTL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00911 424 Pfam Ion channel 144 222 IPR013099 -
Lapu6g00911 424 Pfam Ion channel 271 339 IPR013099 -
Lapu6g00911 424 SUPERFAMILY Voltage-gated potassium channels 253 362 - -
Lapu6g00911 424 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 171 397 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu6g00911 424 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Lapu6g00911 424 Gene3D - 117 234 - -
Lapu6g00911 424 Gene3D - 246 367 - -
Lapu6g00911 424 PRINTS Two pore domain K+ channel signature 302 311 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu6g00911 424 PRINTS Two pore domain K+ channel signature 179 207 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lapu6g00911 424 FunFam Two-pore potassium channel 3 247 361 - -
Lapu6g00911 424 SUPERFAMILY Voltage-gated potassium channels 137 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00911 Lapu-Chr6 9273985 9276210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00911 95 424 Ion Channels AT4G01840 67.560 1.70e-159 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00911 K05389 - gmx:100780438 627.476