Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00873 ATGCTTATATTATCTTGCCTTCCATTTATGATTGTGTCTGGTAAAAATGATAAAGCAATGGAGCCCCCTTCTTTATATGATTCTAGATCACCTTTGTCCTTTGTTGTTGTTCATGATCTACCTCTACCAGCAAGTCTCCATTTGTCAAAGCATGTGCTTTCTGACGGTGCACCAATTGAAGCACTGTCACCAGTCAGTCCTCCTTCATATGGTCCTTTCACAAGTAATGCCCAATCCCCTGCAAGTTCACATTTATCCATACCATTCAAAAAGAAGAGTGAAATGAAACCTCCAATTTCTGGCTTTAAATACATTGCTCCTGTGCATTCTACTGCAGCTGCAGGCCCTTCTGTTTCGACTCAGCCACCATTGTCTCCTTACTCTTCCAATTGTTGTAAACAAGACATGGTGTTGAAAAGAGCCAGTAAGAGTTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTCAATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGTGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCGAGCGAAGTTTCTAAAATAAACTCTTCCCTTTCAATGCACAAGGTTAAACTAGACCCTCGATTAGTGGGTGGATACCAGCTTCTCAATATAACTTGGTTTGAACCACCAGCGCCTTCACAAGCTCCTGCGTTAGCTGCATCACCTGTGAAGACACCTTTGTATGATTCACCTACCCCTATGTCATCATCCAGTTCTTCAGGAAGGCATTCAAATCTGTTTATTATTCTTGGAATTGCTATTGGCATAATTTTTATTGGTGTCATATCTGTTCTTATATTCTGTTTATGTACATTCCTGCCAAAAGAAAACAAACGTCCCATCGAAACAGAAAAGCCAAGGACAGAGAGTACAGTGTCAGCTGTGGGTTCTCTTCCTCACCCAAGTAGTACACGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGTGTACTTGGAGAAGGAGGCTTTGGTAGAGTTTTTAAAGGTGTCTTGAATGATGGTACTCCTGTTGCAATAAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAGGTTGAGATGCTTAGCCGATTGCATCATCGTAACCTTGTAAAACTAGTCGGATACTTCAGTAATCGTGACTCGTCACAAAATTTACTTTGTTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCGCTTGATGCTGCAAGGGGGCTTTCATACCTGCATGAAGACTCACAGCCATGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTATTACTGGAACTGCTTACTGGGAGGAAGCCTGTGGATATGTCACAGCCAACTGGACAAGAGAATCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGACAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAGGAAGATTTTGTTCGTGTTTGCACAATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCCGTGTTAGCCTCATCCAATACTCGAGCCAACCTGAGACAGTCCTCTAGTACTTTTGAATTTGATGGAACATCTTCTGTATTCTCTTCGGGTCCTTATTCTGGTCTAAGTACCTTTGAAAATGACAACATTTCCAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGA 2109 0.4196 MLILSCLPFMIVSGKNDKAMEPPSLYDSRSPLSFVVVHDLPLPASLHLSKHVLSDGAPIEALSPVSPPSYGPFTSNAQSPASSHLSIPFKKKSEMKPPISGFKYIAPVHSTAAAGPSVSTQPPLSPYSSNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQNPSWNDFLNELAVQLGLRNTQIELINFYVLSVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPALAASPVKTPLYDSPTPMSSSSSSGRHSNLFIILGIAIGIIFIGVISVLIFCLCTFLPKENKRPIETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRANLRQSSSTFEFDGTSSVFSSGPYSGLSTFENDNISRTVVFSEDLCEGR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00873 702 Gene3D Transferase(Phosphotransferase) domain 1 436 656 - -
Lapu6g00873 702 FunFam Receptor-like serine/threonine-protein kinase ALE2 338 435 - -
Lapu6g00873 702 CDD STKc_IRAK 364 634 - -
Lapu6g00873 702 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Lapu6g00873 702 Pfam Protein kinase domain 359 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00873 702 Gene3D Phosphorylase Kinase; domain 1 339 435 - -
Lapu6g00873 702 SUPERFAMILY Protein kinase-like (PK-like) 333 635 IPR011009 -
Lapu6g00873 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Lapu6g00873 702 FunFam Receptor-like serine/threonine-protein kinase ALE2 436 653 - -
Lapu6g00873 702 ProSiteProfiles Protein kinase domain profile. 358 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00873 702 PANTHER OS01G0750732 PROTEIN 127 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00873 Lapu-Chr6 8920119 8926394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00873 3 702 Receptor kinase-like Gene Family AT4G02010 66.950 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu6g00873 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00873 - - gmx:100775615 1227.62