Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00868 ATGGAAATTTACCAATTTTCATCCACAGCTTTAAATTTGAAAGAAATCCAAGTGGGTTATGGTTCTACACAACAGGATGATGTGTTCTTCCAAGGGAAAGAGAGTTTCTCTGGAATGGAATTTCTGGGAGCTATTGAGGATGAAAAAGAGACGAAATTGTTGGAGGATCAATATCAGAAACAGCTACAAGAACCCCAAGTTGATAGGTTGCTAGAAGAGTTTAACTATGACCATGATATGCAACTGAAACCAGCACAACAATTCTATGAAACTACAGCTAAATATGGCATAGAATCAACTGAACAGAATAAGGTGCCACCATCATTAGCATCCTTAGAGCTGCTGAGAAACTACGGAAACAGATTCAAGACGATAAGCGAGCAAAATATAACGAAACCTTCTTTTGATCACCACAAGATATCAACTGAAGAAATAATGAGAGTGGCTGGAGCAAGGTATATTCAATATTCTGCACATTGGAATGATAGTTTTTGCATTCCTATGCACCCATACGGATTGGATTCTGTTGGTTTGTCTGAGGAAGAAAATAGAGACGTAGAACTTGCTCAGTTTCTCCTTGCTGCAGCTGAGAGGGTAAGTTGCCAACAATTTGAACGTGCTAGCAGGTTACTTCTCCACTGTCAATGGAATTCATCAGCCAATGCAAGCCCTGTTCAAAGAGTTATCTTTCACTTCGCTCAAGCACTTCGAGAGAGAATCGACAGAGGACTAGGAAGGGTGACAGCTAAGGGATCAGAGAAAAATGAAGAAAGGGCGTTAATTCAAAAGATTGACACCAACGTTGCTCTAACATGCCATCAAAATGTTCCTTTCAATCAAGTCATGCAATTCACTGGTATACAAGCTATAGTGGAACATGTTGCATCTCAGACCAAAATTCATCTTATTGATCTTGAAACAATAAGTGGGGTGCACAATACAGCTTTGATGCAAGCACTGACTGAACGCCAGGATTGCAAGGTGCAGCTTTTCAAGATAACTGCACTTGCACTTAATTCATGCAAAACCATGATACAAGAGACTGGAAAAAGGTTAGCTAGCTTTGCTGAATCCTTGAACTTACCCTTTTCATATAATGCGGTTTTTGTGACAGACTTTGCAGAGATAAGGGGAGATCATTTTGAAATTGGAGAGGATGAAGCTGTGGCTGTCTACTCTCCATATTTTCTAAGGTGCATGGTATCAAGGCCAAATTGTATGGAAAACTTGATGAGGGTTATATGGACTATCAAACCGGTTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCACCCTCCTTTGTGAACCGCTTCATTGAAGCGTTGTTCTTCTACTCAGCATTTTTTGATTGCCTTGGAACCTGCATAAATCATGAGATTGAGTGCAGAATGAAAATAGAAGCAGTATTATCTGAAGGGATACGAGACATTGTTGCTATGGAAGGGAGGGAAAGAAAAGTTAGAAATGTGAAGATAGATGTATGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAACCGGGTTTAGTGATTCATCTCTTTACCAAGCTCACTTGGTCAACAAAGAGTTTGCTTTTGGGAAATTCTGCACTATAGACAAGAACGGCAAGTGTCTTTTAGTTGGATGGAAAGGGACCCCAATTCATTCAATCTCAGCTTGGAGGTTTCTTTAA 1680 0.3994 MEIYQFSSTALNLKEIQVGYGSTQQDDVFFQGKESFSGMEFLGAIEDEKETKLLEDQYQKQLQEPQVDRLLEEFNYDHDMQLKPAQQFYETTAKYGIESTEQNKVPPSLASLELLRNYGNRFKTISEQNITKPSFDHHKISTEEIMRVAGARYIQYSAHWNDSFCIPMHPYGLDSVGLSEEENRDVELAQFLLAAAERVSCQQFERASRLLLHCQWNSSANASPVQRVIFHFAQALRERIDRGLGRVTAKGSEKNEERALIQKIDTNVALTCHQNVPFNQVMQFTGIQAIVEHVASQTKIHLIDLETISGVHNTALMQALTERQDCKVQLFKITALALNSCKTMIQETGKRLASFAESLNLPFSYNAVFVTDFAEIRGDHFEIGEDEAVAVYSPYFLRCMVSRPNCMENLMRVIWTIKPVIMIVLEVEANHNSPSFVNRFIEALFFYSAFFDCLGTCINHEIECRMKIEAVLSEGIRDIVAMEGRERKVRNVKIDVWRRFFARYRMVETGFSDSSLYQAHLVNKEFAFGKFCTIDKNGKCLLVGWKGTPIHSISAWRFL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00868 559 ProSiteProfiles GRAS family profile. 179 557 IPR005202 -
Lapu6g00868 559 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 547 IPR005202 -
Lapu6g00868 559 Pfam GRAS domain family 189 557 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00868 Lapu-Chr6 8885477 8888178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00868 175 558 GRAS Transcription Factor Family AT1G66350 29.610 2.72e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu6g00868 GRAS 1e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00868 - - gmx:100791952 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00868 6 8885477 8888178 Lapu6g00868 6 8885477 8888178 ECH