Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00867 ATGGTGAACAAAAAAGTTAAGTCTTCTTCCAATAATCAAAAACAACTTCGAGAGACAACAAGAGATGCTACTAGAAGAATCTTGAAGACCAGGATAAAAGAATCCGTAAATGAAATCCATGCAAAACAAGGGAAATCAGTCAAAGAAAAAGTTCAAAAACATCGGAAGAATCTTCAGGCTTTGTTATCAGAGGTTAAATCAGTAATATCAGAGAGAGAGTCTTTGGGTACTGAGGAGAATATCAATATTCTGTCTTCAAGAATTCAAAGTCCATTCTATAAGCACAACAGTTCCCCTATCAGTATTGCAGATGAAGATCAAACCTGCAACGAGGACTTTCCAATTGCAAACAGCATCAAGATTCCATACTTGGAAAAACTACCCTCCTATATATCTTGGGTACATGTGGCTAGAAATGAGAAAATGGCAGAAGATCAATCAGTTATTGGAAAAGAACAAATGTACTGTGATATAAATAGAGGTGAAATGGTAATATGCAGTGACAGTGATGAAGAGACGGTAAATGTTGAAGATGTTAAACATGAATTCACTGAGGCTGAAGACCAAATTCTGTGGAAGACACTTCATGAATATGGATCAAATGGAAACGTATTGGCTATCATTAAAGAGTTTGTTAAGACTACTGATTCACAAATCCAGGAGAGGTTTGAAAAACTAAAGGAAATTAATCTGGAAAGTCTAAACAAGCATTCTAAAGATTGTCATTGTAGAGGATGTGAATCTCATATTGGGATATGTTTGGAGAAAGGCTTGACTGCTAATATAGAGTCTCTCGATAATCTTTTTTGTCGTCAATGCTTGATCTTTAATTGTTCTCTGCATGGCACTTCTCAACCTTTGGTATATCCGACAGAAAAGCAACTAGTTTGGTCTGAAGATGAAGGTGACAGACAACCATGTAGTGATCAATGTGGCCTTCTGTTAAAGGATGTCAGGCTTTCCTCAGAAAATTCAGCTGAGAAAAGAGTTAATAATCTTAAATTGGATTGGAAACCACTGGAGCGAGAGCTATACTTGAAAGGGGTAGAACTGTTTGGAAACAACAGTTGCCGTATCGCTCACAACTTACTCCCAGGCTTGAAGACGTGCTCGGAAGTAGCTAGGTACATCTTAGCCGAGGAGGAGTCATTGCTTCAGGGACTCATGCCACTCTCAATAACAAATAACAATGATCAGATTAATGCAGAGAGCATGTTTAGACAGAGCATGAAACTAGTTTTGAAGCTAAGTTATTTTGCTAGGACCAAGAAACGCCATCAAGATCACAGTTGCCGCGGAGACGGGGCAAATATCCTCGAAAAAAAGCTGATGGGAAAAAACAAAGTAATACGCAGTATACTCCTTGTAGGTGTCACGGAATATGCACAAATGAATGCACTTGTCATCGTGATGGCAATCGTTGTGAAAAATATTGTGGGTGTTCAAAGTTATGCCCTAACCGGTTCAGAGGATGTTATTGTGCTAAGAGTCAATGCAGAAGTAAACTGTGCCCATGCTTTGCAATCAACCGTGAATGCGACCCAGATATTTGTCGAAATTGTGGGATTAGGGGAGCTACCTGGAGGTGGAGATGGTCAATGTGGAAATATGAATCTTCTTTTAGGGAAAAAAGAGAGGATTCTTTTGGCAAAGTCCAATGTTGTTGGATGGGGAGTGTTTGCAAAGTGGGTTATTGATGCCCGTCGCTATGGAGACAAATTAAAATTTGCAAACCACTCGTCAAAACCCAATTGTTATGCAAAGGTGATGCTTGTTGGAGGGGATCATCGAGTTGGCATATATGCCAAGGAAAACATTAAAGCTGGTGATGAGATTTTCTATGATTATTTCTATAAAAAAGAATGTGCACCACTATGGGCTCGTCGACCTGATGATGACGAGGCTTCCAAGGAACATGGATCACTTGTTTCTAAACGCAGGACAAAGGTTGATCAGCGCAAGCCAAGCACTCAAGGTATTTTAGCTACCAAATGTCATGAGATACTAAGATCAATTAACTCTAAGCTTAAGAGGTGA 2037 0.3927 MVNKKVKSSSNNQKQLRETTRDATRRILKTRIKESVNEIHAKQGKSVKEKVQKHRKNLQALLSEVKSVISERESLGTEENINILSSRIQSPFYKHNSSPISIADEDQTCNEDFPIANSIKIPYLEKLPSYISWVHVARNEKMAEDQSVIGKEQMYCDINRGEMVICSDSDEETVNVEDVKHEFTEAEDQILWKTLHEYGSNGNVLAIIKEFVKTTDSQIQERFEKLKEINLESLNKHSKDCHCRGCESHIGICLEKGLTANIESLDNLFCRQCLIFNCSLHGTSQPLVYPTEKQLVWSEDEGDRQPCSDQCGLLLKDVRLSSENSAEKRVNNLKLDWKPLERELYLKGVELFGNNSCRIAHNLLPGLKTCSEVARYILAEEESLLQGLMPLSITNNNDQINAESMFRQSMKLVLKLSYFARTKKRHQDHSCRGDGANILEKKLMGKNKVIRSILLVGVTEYAQMNALVIVMAIVVKNIVGVQSYALTGSEDVIVLRVNAEVNCAHALQSTVNATQIFVEIVGLGELPGGGDGQCGNMNLLLGKKERILLAKSNVVGWGVFAKWVIDARRYGDKLKFANHSSKPNCYAKVMLVGGDHRVGIYAKENIKAGDEIFYDYFYKKECAPLWARRPDDDEASKEHGSLVSKRRTKVDQRKPSTQGILATKCHEILRSINSKLKR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00867 678 SMART sant 333 383 IPR001005 -
Lapu6g00867 678 SMART sant 179 229 IPR001005 -
Lapu6g00867 678 Pfam SET domain 559 616 IPR001214 GO:0005515
Lapu6g00867 678 MobiDBLite consensus disorder prediction 1 17 - -
Lapu6g00867 678 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 333 425 IPR045318 GO:0006338|GO:0042054
Lapu6g00867 678 MobiDBLite consensus disorder prediction 630 653 - -
Lapu6g00867 678 SMART set_7 545 623 IPR001214 GO:0005515
Lapu6g00867 678 MobiDBLite consensus disorder prediction 630 656 - -
Lapu6g00867 678 SUPERFAMILY SET domain 531 619 IPR046341 -
Lapu6g00867 678 Coils Coil 51 71 - -
Lapu6g00867 678 ProSiteProfiles SET domain profile. 365 617 IPR001214 GO:0005515
Lapu6g00867 678 MobiDBLite consensus disorder prediction 1 23 - -
Lapu6g00867 678 Gene3D SET domain 561 623 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00867 Lapu-Chr6 8873347 8881173 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu6g00867 SET 7.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00867 - - gmx:100791431 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00867 6 8873347 8881173 Lapu6g00867 6 8873347 8881173 ECH
Lapu6g00867 6 8873347 8881173 Lapu7g00554 7 6267251 6285432 PCT