Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00862 ATGTCATCGATTCAACGTTCCGCGACGAGTTCTGGATCTGAAGCAGGAGATCCGCAAATTGATGAGAGAAAGCGGAAGAGGATGCTGTCGAATCGCGAATCTGCACGGCGATCACGGATGAGGAAGCAGAAACAGCTAGAGGATTTGACCGATGAAGTTAGCAGATTACAAGGCGCGAACAAGAAGCTTGTCAAGAACATAACGGCTAAGGAAGAAGCTTGTGCTGAGACCGAAGCCGCTAATAGCATTTTGAGGGCTCAGACCATGGAACTGACCGAACGATTGCGCTTCTTGAACTCTATCCTTGAAATCGCTGAAGAGGTAGGAGGTTTATCCTTTGAGATTCCTGATATTCCAGATCCTCTCCTTAAGCCGTGGCAGATTCCTCATCCGACGCAACCTATTATGGCCACAGCAAATATGTTTCTGCGCTGA 435 0.4805 MSSIQRSATSSGSEAGDPQIDERKRKRMLSNRESARRSRMRKQKQLEDLTDEVSRLQGANKKLVKNITAKEEACAETEAANSILRAQTMELTERLRFLNSILEIAEEVGGLSFEIPDIPDPLLKPWQIPHPTQPIMATANMFLR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00862 144 Pfam bZIP transcription factor 23 76 IPR004827 GO:0003700|GO:0006355
Lapu6g00862 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 67 IPR004827 GO:0003700|GO:0006355
Lapu6g00862 144 MobiDBLite consensus disorder prediction 1 52 - -
Lapu6g00862 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Lapu6g00862 144 Gene3D - 21 78 - -
Lapu6g00862 144 SUPERFAMILY Leucine zipper domain 23 71 IPR046347 GO:0003700|GO:0006355
Lapu6g00862 144 FunFam BZIP transcription factor 21 72 - -
Lapu6g00862 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Lapu6g00862 144 Coils Coil 32 80 - -
Lapu6g00862 144 MobiDBLite consensus disorder prediction 17 52 - -
Lapu6g00862 144 CDD bZIP_plant_GBF1 24 68 IPR045314 GO:0003700|GO:0006355
Lapu6g00862 144 MobiDBLite consensus disorder prediction 1 16 - -
Lapu6g00862 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00862 Lapu-Chr6 8840306 8841632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00862 21 142 bZIP Transcription Factor Family AT3G62420 56.557 5.91e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g00862 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00862 K25786 - gmx:778144 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00862 6 8840306 8841632 Lapu6g00862 6 8840306 8841632 ECH
Lapu6g00862 6 8840306 8841632 Lapu7g00558 7 6309576 6310686 PCT