Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00839 ATGTCAGGCATCAAGGAGTCAAACGATGCCGTTTGCTTCTACTCGGTGCTTGGGATTGGCAAACATTCCAGCGATGGTGAAATTCGATGCGCTTATCGTAAGATGGCTCTGAAGTGGCATCCTGATAGATGGACCAAGGACCCAAAGTTTGCCGCAGAGGCAAAAAAACAGTTCCAGCAAGTTCAAGAGGCTTATTCAGTTTTGTCCAACACAGGGAAGAGAAAGATATATGATGCTGGTTTGTTTGGTCTAATTGGAGAGGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGATTTTGATGATGCAGAATGTAAGACCCAAGGATGAGAAAGGGACAATGAATCTACAAGGATTGTTGATGGACATGATGGAAGATAATGAAGGGATAGGAAAGTCTGGGTTAAGCTGGAATTCATCTCCATGTCCTACAAAGAGGACACGAATTTTATGA 459 0.427 MSGIKESNDAVCFYSVLGIGKHSSDGEIRCAYRKMALKWHPDRWTKDPKFAAEAKKQFQQVQEAYSVLSNTGKRKIYDAGLFGLIGEDDDEGFVDFMQEMILMMQNVRPKDEKGTMNLQGLLMDMMEDNEGIGKSGLSWNSSPCPTKRTRIL* 153
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00839 152 Pfam DnaJ domain 13 78 IPR001623 -
Lapu6g00839 152 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lapu6g00839 152 PANTHER PUTATIVE, EXPRESSED-RELATED 7 133 - -
Lapu6g00839 152 Gene3D DnaJ domain 3 91 IPR036869 -
Lapu6g00839 152 SMART dnaj_3 11 73 IPR001623 -
Lapu6g00839 152 Coils Coil 51 71 - -
Lapu6g00839 152 SUPERFAMILY Chaperone J-domain 10 101 IPR036869 -
Lapu6g00839 152 CDD DnaJ 12 70 IPR001623 -
Lapu6g00839 152 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lapu6g00839 152 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lapu6g00839 152 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lapu6g00839 152 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu6g00839 Lapu-Chr6 8619154 8622044 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00839 12 79 C2H2 Transcription Factor Family AT1G74250 49.275 1.99e-14 67.8