Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00805 ATGTCCTTCGCATCTCCAACATGGATAAAATCCCTCTCGTGTGCGTTCCCTGTGAAGCAAACCTCAGGGGACACCTTTATCTCAACTATCCTTCAATGGCTCAGATTTATCTTCCTCTCGCCATGTCCACAAAGAACTATATTATCTTTCGTCGATGTCGTTCTCCTCTTGTTTCTCTTCTTGTTTGCTGTCACCAAGCTCTGGAAAAGGTTCACCTCCTATGGCGGTTTCGGCACTCATCTCAACGAACCACTCGTCAGAAATAGCAGATCCATTTTCTTGACTATCCGGTTCAAGCTAACCTTCACCGCAGAGGTTGTTTTGACTATACTTTACACGGTTGCTACCGTTCTTGCTTTTAGCAGTCCCTCGAAGGTGCCGTGGAAGCATGTTGACGACGTGTTTTGGTTAGTCCAGGCCATAACACATGCGGTGCTTGTACTCTTAATCACGCATGAGAAAATATTTGAAGCTGTTACACACCCTCTTGCGCTTCGTCTTTATTGGATTGCGAATTTCTTTGTGACTTCCTTGTTCACAGTTTCTGCGATTATGCGATTGGTCACCGTGGACGTGGATGAAAGCAACGACTTTAAGGTGGATGACGTGGTCTCTTTCATTTCGCTCCCTCTGTCGTTATTTCTTCTTTTTGCTGCCGTTAAAGGATCCACCGGTATTGTATTGTCGAGAGAAGAAAGTGGACGACTTGTTGAGGAGGAAACTAAGTTGTATGATGGGAATGAGAGAAAGCCCGAGGTCAGTGGCTTCGCTTCAGCTTCTATATTATCTAAGGCTTTTTTTATTTGGATAAATCCCTTGTTGCGTAAGGGGTACAAGTCCGCACTGAAGATTGATGATGTTCCAACGCTTTCTCCAGAGCATAGAGCTGAGAGGATGTCATCTATTTTTGAATCAAAATGGCCTAAATCAAACGAGAAGTCGAAGCATCTGGTTAGAGTGACTTTGCTTCGGTGCTTTTGGAAGGAGTTAGCCTTCACCGCCTTCCTTGCAATCATTAGGCTCTGTGTCATGTTTGTGGGGCCGGTTCTGATACAAAGTTTTGTGGATTTCACATCAGGGAAGAGAAGCTCTGAATACGAAGGATACTACCTCGTGTTGATTCTTTTGGTTGCTAAGTTCATCGAAGTCGTGAGTACTCATCATTTCAACTTCCAATCTCAGAAGCTTGGGACGCTTATACGGAGCACTGTTATCCCCGCTTTGTACGAGAAGGGGTTAAAACTATCATTCTCTGCTCGGCAGGATCATGGGATAGGGACCATTGTGAATTACATGGCTGTTGATACCCAGCAACTCTCTGACATGATGCTTCAGTTAAATGCAGCGTGGATGATGCCACTTCAGGTTGCCATTGGCTTGTTTCTACTTTGCAATTGTCTTGGTGCCTCAGTGATCACCGCGTTTCTCGGTCTTCTCAGTGTTTTTGTGTTTGCTGTGATTTGTACCCGTAGTAACAACCGCTTTCAATATAATGTGATGAAAAGTCGTGACTCGAGAATGAAGGCTGTGAATGAGACGCTTAATTACATGCGTGTGATCAAGTTTCAGGCCTGGGAGGAACATTTCAACCAAAGAATCATGGGATTCCGTGAGACTGAGTTTGGTTGGCTCTCCAAGTTGATGTTCACAATATCTGGCAATATGGTTGTGATGTGGAGCACGCCCTTGTTGATATCAACTCTCACGTTTGGAACGGCTATTTTGCTCGGAGTTCAACTTGATGCTGCTACAGTCTTCACAACAACAACTGTGTTCAGGATATTGCAGGAGCCTATTAGGACATTCCCACAGTCTATGATATCTCTCTCACAAGCATTGATATCATTGGAGAGGCTAGATAAGTTCATGTTGAGCAGGGAACTGTTGGATAGTTCAATTGAGAGAGAGGAAGACTGCGGTGGGCAAGCGGCAGTGGAAATCATAGATGGGACGTTTAGCTGGGATGATGATAACACGCAACACGACTTGAAAAATATTAATTTGGAGATCAAAAAGGGGAAGATTTCGGCAATTGTTGGGACTGTAGGGTCAGGAAAGTCCTCTCTCCTCGCATCAATTCTTGGAGAGTTGCGTAAGATTTCTGGGAAGGTTCGAGTTTGTGGAAGTGTTGCTTATGTTGCACAAACATCTTGGATTCAGAATAGGACTATTGAAGAAAACATTCTCTTTGGTTTACCAATGGACAGGCAGAGGTACAATGAAGCTATCAGGGTGTGTTGTTTGGAGAAAGATTTGGAAATGATGGAATATGGGGATCAGACAGAAATTGGAGAGCGTGGTATCAACCTAAGTGGAGGCCAGAAGCAGCGGATACAACTTGCCAGGGCTGTGTATCAAGACTGTGATGTCTATCTTCTCGATGATGTTTTCAGTGCTGTTGATGCTCATACTGGCTCAGAAATATTCAAGGAATGCGTGAGGGGAGCTCTAAAAGGCAAGACCACTCTTCTTGTTACGCACCAAGTAGATTTCCTACACAATGTGGATCAAATATTAGTGATGAAGGACGGTATGATAATCCAATCAGGAAAGTACGATGAACTAGTAGATTCTGGACTGGATTTTAAAGCTCTGGTGGTTGCACATGAGACCTCCATGGAACTGGTAGAGCAGAGTGTGGTCATGCCTGCAGAAAATTTGAACAGGCAAACGAAATCTCCAGATGTGACTCCTACTTACAAGGGAACCAATGGTGAAAGCAATTCTCTTGAGCAGGCCCTGTCTAGCAAGAAAAGTCCTAACCTCATCAAAGAAGAGGAAAGAGAAACCGGCAAAGTGAGCTCAGATATCTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACATTGGTATTGGTTCTTTCTTTGTTATGGCAAGGGTCTTTGATGGCAAGTGACTATTGGCTGGCGTATGAAACTTCAGAAGAAAGTGGAATGTTTAACCCTTCTCTCTTCATGTCCATCTATGCAATTATTGCTGCTGTTTCGGTTATCTTGCTGGCGACTAGATATTACTTCTTTACGCTCTTGGGGCTAAAGACTGCACAAATATTCTTCACACAAATTCTTAGTAGCATCTTGCATGCGCCGATGTCTTTCTTTGACACTACTCCGTCGGGGAGAATTCTAAGCAGGGCTTCCTCTGATCAGACCAATGTTGATGTCCTTCTCCCCTTGTTCACCGGAGTTGTAATTGCCATGTACATTACATTGCTCAGTATCTTCATCGTCACCTGTCAAAATTCATGGCCAACATTGTTTTTGATATTCCCTCTTATTTTGTTGAATATATGGTATCGGGATTACTATCTTGCATCTTCTCGCGAATTAACTCGTCTGGATTCAATTACCAAAGCACCAGTTATTCATCACTTCTCTGAAAGCATTGCTGGCGTCATGACAATCCGTGCATTCAGACAGCAGAAGAATTTTTGTGAAGAAAATCTAAGACGGGTGAATGCTAATTTGTGTATGGATTTCCACAACTATAGCTCCAATGTGTGGCTGGGAGTACGCTTAGAGTTGCTTGGAAGCTTTGTCTTTTGCATTTCTGCCTTGTTCATGATCATCTTACCCAGTAGTATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGGTTGACCTTAAACGCTGTCTTGTTCTGGGCTGTATACATGAGTTGTTTCATAGAAAACAAGATGGTGTCTGTTGAGAGGATAAAGCAGTTTACAAATATTCCATCGGAACCAGCATGGAATATCAAGGATCATCTACCTCCTTCAAATTGGCCCGGTCAAGGCAATGTAGATATCAAAGACCTGCAGGTGAGATATCGTCCAAACACTCCTCTGGTGCTCAAAGGCATTACTGTAAGCATAAGTGGAGGTGAAAAAGTTGGAATTGTGGGTCGAACGGGCAGTGGAAAGTCAACTTTAATTCAAGTATTCTTCAGGCTGGTGGAACCTTCGGGAGGGAAAATAATAATTGATGGTGTAGACATATCCATCTTGGGACTTCACGATCTTAGATCACGGTTTGGCATCATTCCTCAGGAGCCTGTGCTTTTTGAAGGAACTGTCAGAAGCAACATTGATCCAATTGGACAATATACAGATGAAGAAATATGGAAGCTTGGAACGTTGTCAACTAAAAGATGTTGTAGCGGCTAA 4164 0.4337 MSFASPTWIKSLSCAFPVKQTSGDTFISTILQWLRFIFLSPCPQRTILSFVDVVLLLFLFLFAVTKLWKRFTSYGGFGTHLNEPLVRNSRSIFLTIRFKLTFTAEVVLTILYTVATVLAFSSPSKVPWKHVDDVFWLVQAITHAVLVLLITHEKIFEAVTHPLALRLYWIANFFVTSLFTVSAIMRLVTVDVDESNDFKVDDVVSFISLPLSLFLLFAAVKGSTGIVLSREESGRLVEEETKLYDGNERKPEVSGFASASILSKAFFIWINPLLRKGYKSALKIDDVPTLSPEHRAERMSSIFESKWPKSNEKSKHLVRVTLLRCFWKELAFTAFLAIIRLCVMFVGPVLIQSFVDFTSGKRSSEYEGYYLVLILLVAKFIEVVSTHHFNFQSQKLGTLIRSTVIPALYEKGLKLSFSARQDHGIGTIVNYMAVDTQQLSDMMLQLNAAWMMPLQVAIGLFLLCNCLGASVITAFLGLLSVFVFAVICTRSNNRFQYNVMKSRDSRMKAVNETLNYMRVIKFQAWEEHFNQRIMGFRETEFGWLSKLMFTISGNMVVMWSTPLLISTLTFGTAILLGVQLDAATVFTTTTVFRILQEPIRTFPQSMISLSQALISLERLDKFMLSRELLDSSIEREEDCGGQAAVEIIDGTFSWDDDNTQHDLKNINLEIKKGKISAIVGTVGSGKSSLLASILGELRKISGKVRVCGSVAYVAQTSWIQNRTIEENILFGLPMDRQRYNEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDVYLLDDVFSAVDAHTGSEIFKECVRGALKGKTTLLVTHQVDFLHNVDQILVMKDGMIIQSGKYDELVDSGLDFKALVVAHETSMELVEQSVVMPAENLNRQTKSPDVTPTYKGTNGESNSLEQALSSKKSPNLIKEEERETGKVSSDIYKLYCTEAFGWWGITLVLVLSLLWQGSLMASDYWLAYETSEESGMFNPSLFMSIYAIIAAVSVILLATRYYFFTLLGLKTAQIFFTQILSSILHAPMSFFDTTPSGRILSRASSDQTNVDVLLPLFTGVVIAMYITLLSIFIVTCQNSWPTLFLIFPLILLNIWYRDYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRAFRQQKNFCEENLRRVNANLCMDFHNYSSNVWLGVRLELLGSFVFCISALFMIILPSSIIKPENVGLSLSYGLTLNAVLFWAVYMSCFIENKMVSVERIKQFTNIPSEPAWNIKDHLPPSNWPGQGNVDIKDLQVRYRPNTPLVLKGITVSISGGEKVGIVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGVDISILGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEEIWKLGTLSTKRCCSG* 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00805 1387 SUPERFAMILY ABC transporter transmembrane region 948 1247 IPR036640 GO:0005524|GO:0016020
Lapu6g00805 1387 MobiDBLite consensus disorder prediction 887 921 - -
Lapu6g00805 1387 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Lapu6g00805 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1260 1376 IPR027417 -
Lapu6g00805 1387 SUPERFAMILY ABC transporter transmembrane region 322 623 IPR036640 GO:0005524|GO:0016020
Lapu6g00805 1387 CDD ABCC_MRP_domain1 645 844 - -
Lapu6g00805 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 865 IPR027417 -
Lapu6g00805 1387 FunFam ATP-dependent bile acid permease, putative 1251 1385 - -
Lapu6g00805 1387 FunFam ABC transporter C family member 4 628 886 - -
Lapu6g00805 1387 CDD ABC_6TM_ABCC_D2 951 1242 IPR044726 GO:0140359
Lapu6g00805 1387 SMART AAA_5 1293 1378 IPR003593 GO:0016887
Lapu6g00805 1387 SMART AAA_5 672 853 IPR003593 GO:0016887
Lapu6g00805 1387 Gene3D ABC transporter type 1, transmembrane domain 301 624 IPR036640 GO:0005524|GO:0016020
Lapu6g00805 1387 Gene3D ABC transporter type 1, transmembrane domain 913 1248 IPR036640 GO:0005524|GO:0016020
Lapu6g00805 1387 FunFam ABC transporter C family member 10 314 627 - -
Lapu6g00805 1387 Pfam ABC transporter transmembrane region 953 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g00805 1387 Pfam ABC transporter transmembrane region 332 598 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g00805 1387 Pfam ABC transporter 663 796 IPR003439 GO:0005524
Lapu6g00805 1387 Coils Coil 1138 1158 - -
Lapu6g00805 1387 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 611 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g00805 1387 MobiDBLite consensus disorder prediction 887 919 - -
Lapu6g00805 1387 Gene3D - 1251 1382 IPR027417 -
Lapu6g00805 1387 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 868 IPR003439 GO:0005524
Lapu6g00805 1387 FunFam ABC transporter C family member 5 914 1248 - -
Lapu6g00805 1387 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524|GO:0016887
Lapu6g00805 1387 Gene3D - 625 890 IPR027417 -
Lapu6g00805 1387 Pfam ABC transporter 1284 1373 IPR003439 GO:0005524
Lapu6g00805 1387 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 953 1230 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g00805 1387 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 257 1376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00805 Lapu-Chr6 8325299 8332328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00805 627 861 Calmodulin-binding Proteins AT2G36910 30.116 5.64e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00805 - K05666 gmx:100808752 2254.17