Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00788 ATGAAGGGGAAAAGCCACAAGACTGGAAAGAAGCAGAGTAGGAAGATGAAGGGTGCGTTGGGTAACAGCACCACCAAGCACTTGCAGCTCCAGCTAGGTCAAGTCTCCCTTGTTCCTCTCCAGCAACCTTCTTCTACCACTTCTTCCGAGGCTGTCTCTTGCTTCCAGAACCTTCTCGATGCCGAACCTCCCAACACGTCTTCATCACGCGCCGCGCTCACTGACGACACTGTCGCTGACGACAGAGACTGTATTCTCAGCCAGGACTTCTTCTGCACTCCGGACTACATTACTCCGGATAATCAGCAAACTTTTAATGGCTTTGATTGCGATAGGGATAATACTCCCTGCCCCAAATCACCTGACAAGCTTAGCACTGCGCAGAGCAAGAGATGCAGACTAGATGCTATGTCGGTTCAACCTCTCAGCCCCACCTTCTCTAGTGACCATCAGCCAGCTGTGGAACTGGGAAAGGATTCTGTTACCGAAGAATTTGCTTTGGAGAAAACAATATTACCTGCTAAACCAAAGGCTCAAAATTATGTGTCCCAATCTGCAGTCGCATTGCGTTGCCGGGTTATGCCTCCTCCTTGCTTTAGTAACCCATATTTAAAAGATGGTTCAGAGAGGGAGGTAGATCCTTTTCGGAGCCAAAGATTGAAATATGCAGGTCTCTTCCCTGCAATTAGTGGTGGTGGTGATGGGCTTTCACGCTATCGCGATGACTTTCATGAAATTGAGCAAATTGGTAGAGGGAACTTTAATAATGTTTTCAAGGTATTAAAACGGCTAGATGGATGCTTTTATGCTGTTAAACAGAGCATCAGACCGTTACGCCTGGAAACTGAAAGGACAAAAGCTTTGATGGAAGTTCAAGCTTTGGCGGCCCTAGGTCTGCATAAGAACATTGTGGGCTACTATTCTTCATGGTTTGAAAATGAACAGCTGTACATTCAGATGGAGCTATGTGATCACAACTTATCCATAAAGAAATATTCTGCGGCATTTACTGAAGCACAAGTGTTAGATGCCTTATTTCAGGTAGCCAATGCTCTGCGATTTATTCACGAGAAGGGAATGGCTCATCTAGATGTCAAACCTGATAATATTTATGTGAAAAATGGTGTTTATAAGCTCGGTGATTTTGGATGTGCGACTCTTCTTGATACTAGCCTGCCAATTGAGGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTTAATGATAATTATGATAATCTTGACAAGGTTGATATCTTCTCCCTGGGAGCTTCTATTTATGAACTAATTCGCAGATTGCCTTTGCCAGAAACAGGATGTCAATTTTTTAATCTCAAAGAGGGCAAGTTTCCCCTCTTGCCTGGTCATTCGTTGCAACTTCAGAACCTGCTCAAGGTCATGATGGACCCGGATCCGGTTAAGCGGCCTTCTGCTCGAGAATTGCTAGAAAATCCCATTTTCGGTAAGATTCAAAGTACTGCATGA 1485 0.4485 MKGKSHKTGKKQSRKMKGALGNSTTKHLQLQLGQVSLVPLQQPSSTTSSEAVSCFQNLLDAEPPNTSSSRAALTDDTVADDRDCILSQDFFCTPDYITPDNQQTFNGFDCDRDNTPCPKSPDKLSTAQSKRCRLDAMSVQPLSPTFSSDHQPAVELGKDSVTEEFALEKTILPAKPKAQNYVSQSAVALRCRVMPPPCFSNPYLKDGSEREVDPFRSQRLKYAGLFPAISGGGDGLSRYRDDFHEIEQIGRGNFNNVFKVLKRLDGCFYAVKQSIRPLRLETERTKALMEVQALAALGLHKNIVGYYSSWFENEQLYIQMELCDHNLSIKKYSAAFTEAQVLDALFQVANALRFIHEKGMAHLDVKPDNIYVKNGVYKLGDFGCATLLDTSLPIEEGDARYMPQEILNDNYDNLDKVDIFSLGASIYELIRRLPLPETGCQFFNLKEGKFPLLPGHSLQLQNLLKVMMDPDPVKRPSARELLENPIFGKIQSTA* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00788 494 FunFam Wee1-like protein kinase 322 491 - -
Lapu6g00788 494 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 95 488 - -
Lapu6g00788 494 Gene3D Transferase(Phosphotransferase) domain 1 322 491 - -
Lapu6g00788 494 ProSiteProfiles Protein kinase domain profile. 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00788 494 Pfam Protein kinase domain 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g00788 494 SUPERFAMILY Protein kinase-like (PK-like) 236 490 IPR011009 -
Lapu6g00788 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Lapu6g00788 494 Gene3D Phosphorylase Kinase; domain 1 233 321 - -
Lapu6g00788 494 FunFam WEE protein kinase 233 321 - -
Lapu6g00788 494 MobiDBLite consensus disorder prediction 1 22 - -
Lapu6g00788 494 SMART serkin_6 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00788 Lapu-Chr6 8215302 8218780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00788 2 491 Core Cell Cycle Gene Families AT1G02970 57.404 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lapu6g00788 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00788 K06632 - gmx:547742 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00788 6 8215302 8218780 Lapu6g00788 6 8215302 8218780 ECH