Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00785 ATGGATGCGTGGAACGAAGATTTTGCGGAGCAGGAGATTGGGAGCTCCGCGGAATCGTTCCAGAAGTTTTTGCTTTCGCAGAGAGATCTATTCAACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGTGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAGAAAGAGTTGCGAGAGATCAGTGCTTTATTTGGTGTCACAGCGACGCAGGTGCGTGATTTTTTCACTGGTCAGCGCTCAAGAGTGAGGAGATTAGTGCAGTTTTCAAAGGAGAGGGCACTAGGTTCTAATTCTTGTGAAGATCATCGTGATGATAAAATAATTTCTGATCCTGTGAGACCAATAAATCCAGCTTCCCTAAACTCTTCTGTCCCATCCAATGTTGAAGAAGCATCTTGTTCAACACAGGATGCTGCCTTGTCTGGCCTAGATGACTCGGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAAGAGACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACGATACAGAATTTTTCCGTATTGTTGTGGTTTTTGAGCAGAGGGGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAGCTGTTGAAGAGCAAACCAGTGTTCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCGGCTATTTTGCAGAGTGTAAATAAACTACGGTTCTACAGGGCATCAGACATATCAAACAGGGCAAGGATTTTGTTGTCAAAGTGGAGCAAATTATTAGCAAGGAACCAAGTAATAAAGACGCCCAATGGTGTTAAGCCTTCTAGTGATGGTCATAAAGAGTTGATTTCTCAGAGTATTGGTCAATTTATGGGCTTTGAATCATGGCATTCAAATATTAATGTTCCCGAAGACTTTCTCTCACTCTCAAGCGAATGTTTGGACAATTTCAGGAAAGTGGGATCTCCACAAGCCTCGAAATTGTTGCCTCCTAGTTTGGATGATTCTAATAAAAGGTCCACACTTGGTGTATCTTCATCGCAATCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGCCAAAAGTCAGTGAGCAGAGGCTCACAAGTGACAAGAGCAGGGCCTGTAAGTCAAGGTCGTCCAATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAGTAAGTATGGGAAATCCGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAATAAACAACCTCAGACAATTCCTGCCAGTATTGCAGCTTGCTCTTCTAAAGTTCCTACTCCTCCCAAAGTTGAAGAAAACAATAAACCTCTGTTACTTGCCTCTAAAACCAGTAATAGGCTGGAAGCTTATTCAAAACCAAAAATGGATGTGAAGGAATCTCTCTGGGAGAAGTGCATTAGGGTTCGGATCCCATGGAAAACACCAGCAGAAGTGGAACTTAAAGATACCTGGAGAGTTGGTGGGGGTGAAAATAGCAAGGAGGTTGATGTCCAGAGAAATAGAGACCGCAGGGAAAAGGAAACTATATATAAAACTATCCAAGAAATGCCACCTAACCCCAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGATGGTGCAGACATAGCAGTTTCCCCCAGTCAGGTTGCAACTCATACTGTTCAAGAGGTGGCCTCCACATCTTCGACAAGTATGGCTCGTGCTGAGCCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTAGCCTTAACTTCTGGACAAGCCGGTAGCATACCGAGTGAAGAAACAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGTTATGGCACGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGAATGGATGGAGCTCAGAAGCATCAAAAAACCCCTTTTCACGGCGAAGTGTAGCATCTGATAGAATTATCCAGAACCATGCTGCAGTGGCAACAACCAACTTATTAACTCACATTCCCTTGACTAGCGGTACTGCAGTAAGACAACAGCCGACAGAAGTGGTTTCATCTTCGAGGCATCTCACAAGCACCACAGTTTCTCCATATTCACTGCATCAGGCAACTAATGTTAATCCTGAAAGGCCACAACCAGTGGGGCATGTACAAATGCCATCCTCAAATGTAGGTTTAACTATGAAGAACTTAATCACTACCAATGCATCTTCAGTTAACTTTTCTGGCACTCATTCAACTCTAGCAATGCGGGGTGATGGCAACAATTATGTAAAACCCGTACATAATTTGAGTGTACAATATGAGGGTGTGTCCAATTCCTTCCCACAATCATCCTTCAAGTTACCCTCACCAACGCCGTCAAACTCAGCCTCACAGCAACAAAGACATCAACATGTGGTCCAGGAGGCCCATTATACTGAACCTCCTTATCGTAACCCTAGCCGTTCCTACCCACCACAAACCGAAAAATCTGACCATGGGTCTGAAAACCTGTGGAGAGTTAGGCAAGATGTGTCATCCAGTTATCATTCTCAAAGAAATCAAAACGACTATAACACAATGGTTGGGGGATCCAGGCAATCTGGTTTTTGGGATAGAAATAATCATGGAAGGGAAGATTTTGAATCATGGAGTCCTGATAACAGTCCAACTAGAAATCCTAGGTATATACCAGGTAGAAACTGCCCAGAGTCCAGAGTGAATCATGGAAGAAATAATAGACCTGAATGGTCAAGGCAGAGGGGTTCTTCTGGACACTGGGACCCTGGCAGACAGGGAAATAGAAAGTGGCATGATGAGAGGCGATAA 3072 0.4284 MDAWNEDFAEQEIGSSAESFQKFLLSQRDLFNSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALGSNSCEDHRDDKIISDPVRPINPASLNSSVPSNVEEASCSTQDAALSGLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNFSVLLWFLSRGGGITLATWLSKAAVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRASDISNRARILLSKWSKLLARNQVIKTPNGVKPSSDGHKELISQSIGQFMGFESWHSNINVPEDFLSLSSECLDNFRKVGSPQASKLLPPSLDDSNKRSTLGVSSSQSRERRKVQLVEQPGQKSVSRGSQVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTIPASIAACSSKVPTPPKVEENNKPLLLASKTSNRLEAYSKPKMDVKESLWEKCIRVRIPWKTPAEVELKDTWRVGGGENSKEVDVQRNRDRREKETIYKTIQEMPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADIAVSPSQVATHTVQEVASTSSTSMARAEPDLELLAVLLKNPELVLALTSGQAGSIPSEETVKLLDMIKRGGANLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTNGWSSEASKNPFSRRSVASDRIIQNHAAVATTNLLTHIPLTSGTAVRQQPTEVVSSSRHLTSTTVSPYSLHQATNVNPERPQPVGHVQMPSSNVGLTMKNLITTNASSVNFSGTHSTLAMRGDGNNYVKPVHNLSVQYEGVSNSFPQSSFKLPSPTPSNSASQQQRHQHVVQEAHYTEPPYRNPSRSYPPQTEKSDHGSENLWRVRQDVSSSYHSQRNQNDYNTMVGGSRQSGFWDRNNHGREDFESWSPDNSPTRNPRYIPGRNCPESRVNHGRNNRPEWSRQRGSSGHWDPGRQGNRKWHDERR* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00785 1023 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Lapu6g00785 1023 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1007 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 863 887 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 685 728 - -
Lapu6g00785 1023 Gene3D - 66 127 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 369 430 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 921 952 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 863 1023 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 374 396 - -
Lapu6g00785 1023 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 710 728 - -
Lapu6g00785 1023 MobiDBLite consensus disorder prediction 405 423 - -
Lapu6g00785 1023 SMART HOX_1 68 130 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00785 Lapu-Chr6 8187091 8196010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00785 464 732 Homeobox Transcription Factor Family AT4G02560 42.804 1.05e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00785 - - gmx:100806633 1714.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00785 6 8187091 8196010 Lapu6g00785 6 8187091 8196010 ECH