Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00728 ATGAGCATGGAAAATGCAAGTACATCCAGCTTGGCGAGAACGAAGTCGGATGATGTGGCGGAGACGGTGGCGATGACAAATGTGAAGTCGTCACCGTCGGCGGAGGGTGGCGTTGTGCTGTCGAGGAAATCAAGCCAGAGGATGACGGCGGCCTCACCGAGTGGCGGCGGAGGAAGAAACGCACACATAAGGAAGGCGAGGAGCGCTCAGTTGAAGGTGGAGGTGGATGAGGTTGGCAGCGGCGTGGCTCTGAGCCGAGCTTCCAGTGCCAGCTTCGGCCTGTCATTCTCCTTCACTGGCTTCACTCTCCCTTCTGATGAAATCGCCGATTCAAAACCTTTCAGCGACGATGACATTCCGGAGGATATTGAAGCCGGAACTCATAAGCCTAAGTTTCAGACAGAACATACGCTGCCAATATATCTGAAGGCAACGGTGAAGCTTCATTTAGCGATCAACGCTACCAATAGAACATGTTACATGGCTATCAATATAGCATGGTCAGGTTCAGTCTTGTACAAAGTTTCATTTCATTTCACCGATGTGACATACAAGGTAGTGATTAAAGGCATAACTACAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTTAATCCTGGGGAAGTTTTGGCATTGATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAGCACACAATTGGTGGCTCTATCACTTACAACGACCAACCTTATTCCAAGTTTCTTAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCTCACCTTACTGTTAGAGAAACATTGACGTATGCTGCTCGCTTAAGATTGCCAAATACATTAACGAAAGAGCAAAAGGAAAAACGAGCTTTAGAAGTCATCGAAGAGCTGGGATTAGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGCAGTGAGATCATAATCAATCCTTCTCTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGTTGCTACAAAACATAGCAGAGGCTGGTAAAACCGTAGTGATAACAATCCATCAACCATCAAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCCAGTTTATAGGGTGTGCACCCCTTATTACCATGAACCCAGCCGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTACCATCAGAGTTAAAGGATAGAGTGCAGGTGGGCAATGCTGAAGTTGAAACATGCAATGGCAAACCATCTGCTTCAGTTGTACAAGAGTATCTAGAGGAGGCATATGATTCTCGAGTGGCAGAAATAGAGAAGACAAAGCTAATGATTCCTGTCCCTCTTGATGAAGAATTGAAGTCTAAAATTTATTCTTGCAAAAGACAGTGGGGGGCAGGTTGGTTTGAGCAGTTTTCTATTTTATTTTCAAGAGGATTCAAAGAGAGGAAGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTTTCTACCGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAACCCAAAAGGTTTGCAAGATCAGGCAGGACTTCTCTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCTGTCTTCACCGCAATATTCACATTTCCTCAAGAGAGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGCGCATATTTTGTGGCTAGAACTACTAGTGACCTTCTACTGGATTTAGTATTACCAGTGTTTTTCCTCCTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGACGTTTTTTCCTTAGTATTCTTACAGTTTTTCTGTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATTGGAGCTACACTAATGGACTTGAAGAGGGCAACAACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCAGGAGGATTTTTTGTGCAGAAAGTCCCCATATTCATATCTTGGATTCGCTACCTCTCTTTCAACTACCATACGTATAAACTTCTGCTCAAGGTTCAATATAAACACATTACACGGACCATAAATGGGATCACACTTGACAATGGATTCACAGAGATTGCTGCTTTGCTAGGCATGGTTTTTGGTTACCGTCTGTTGGCATATCTCTCCTTGCGGCGGATGAAGCTTCAAGCTGGAAATTAA 2322 0.435 MSMENASTSSLARTKSDDVAETVAMTNVKSSPSAEGGVVLSRKSSQRMTAASPSGGGGRNAHIRKARSAQLKVEVDEVGSGVALSRASSASFGLSFSFTGFTLPSDEIADSKPFSDDDIPEDIEAGTHKPKFQTEHTLPIYLKATVKLHLAINATNRTCYMAINIAWSGSVLYKVSFHFTDVTYKVVIKGITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQHTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVRETLTYAARLRLPNTLTKEQKEKRALEVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQLLQNIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLITMNPAEFLLDLANGNVNDISVPSELKDRVQVGNAEVETCNGKPSASVVQEYLEEAYDSRVAEIEKTKLMIPVPLDEELKSKIYSCKRQWGAGWFEQFSILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVFFLLVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYKHITRTINGITLDNGFTEIAALLGMVFGYRLLAYLSLRRMKLQAGN* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00728 773 SMART AAA_5 209 400 IPR003593 GO:0016887
Lapu6g00728 773 MobiDBLite consensus disorder prediction 1 53 - -
Lapu6g00728 773 Gene3D - 178 417 IPR027417 -
Lapu6g00728 773 FunFam ABC transporter G family member 22 187 417 - -
Lapu6g00728 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 417 IPR027417 -
Lapu6g00728 773 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 177 423 IPR003439 GO:0005524
Lapu6g00728 773 MobiDBLite consensus disorder prediction 1 65 - -
Lapu6g00728 773 ProSitePatterns ABC transporters family signature. 323 337 IPR017871 GO:0005524|GO:0016887
Lapu6g00728 773 Pfam ABC transporter 200 351 IPR003439 GO:0005524
Lapu6g00728 773 Pfam ABC-2 type transporter 518 727 IPR013525 GO:0016020|GO:0140359
Lapu6g00728 773 CDD ABCG_EPDR 174 405 - -
Lapu6g00728 773 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 137 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00728 Lapu-Chr6 7644053 7654953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00728 199 452 Calmodulin-binding Proteins AT2G36910 27.308 2.62e-13 72.0