Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00687 ATGCTGCAAATGATATTGGAGAACGAGATATACTCGAAACAAGATCTCAGAGAGCTTTTGAGTTGCTTCCTTCAGCTCAATTCACCACATCATCATGGGGTCATAGTCAGGGCTTTCACTGAGATCTGGAATGGCGCCTTCTCTGTCAGGTCCAATTCACGCATCAACCGTAAGCCACGTCATCCAACTGAGGCAGAATCTTCGTTGAGGAACCATGCTAATTAG 225 0.4578 MLQMILENEIYSKQDLRELLSCFLQLNSPHHHGVIVRAFTEIWNGAFSVRSNSRINRKPRHPTEAESSLRNHAN* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00687 74 NCBIfam uncharacterized plant-specific domain TIGR01568 1 44 IPR006458 -
Lapu6g00687 74 ProSiteProfiles OVATE domain profile. 1 45 IPR006458 -
Lapu6g00687 74 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 47 IPR038933 GO:0045892
Lapu6g00687 74 MobiDBLite consensus disorder prediction 53 74 - -
Lapu6g00687 74 Pfam Transcriptional repressor, ovate 1 44 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00687 Lapu-Chr6 7184704 7185121 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu6g00687 Ovate 8.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00687 - - gmx:106797222 116.316