Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00686 ATGGGCAAGAAAATGAAGTTTCCTTCCCTCCTCCACAAGAACTCGCACCCCACCACCACCACCACCACCGTCAAACCTTCTTCCACCTCCTGGCCCTGGCCCTCTTGTCACCAACCCCGAACCCTCTCTTTCCGAGCCCAGAACGATGTCGCTTTCAAAACCATCAACCCCGCCTATTTGGACACGCCTGAGAGCTCCCACTCCTTCTTCACAGTCTCACCTGACTCCGGAAGCTTCTCAACGGCTTCAGAAGAAGATTCTAGAAGACCCGATTCCCTTGAGACCCTCATTCGCCCCTTGCGTTCTGACCGTTTGTTCTTCCACCTCGACCAGACAAGCTCCATATTAGAGTCCAAAGCAGGAACATCAACACCAACACCGACAGAAACAACTACAACACCAACACCAACAGAAAAACCTACGACGACAACAACAAAGTTGCCCTTCCGAGACAGCGTGGTCATGTCCGTTGAGTCTCAGGACCCTTACGTGGACTTCCTCAGGTCCATGGAGGAGATGGTAGAGGCCCAGTGCGTTAAAGACTGGGAGGGTCTCCAAGAGCTTTTGTGTTGGTATTTGAAAGTCAATGGAAAAAATAACCATAGTTATATTGTTGGTGCTTTCATTGACTTATTGGTCACTTTTTCTTCCACCCCTTCTTCTTCTAATATAAACTCTCATTCTCCTTCTTCCCCTTTATCATTCTACAGTTCTTCTCTTTCTTCTTCCTGCAGCACTCGCTGTGTTTCCTGTTTGGAAGCTGAGGACGAGGTTGATATAGCTACTCCTAGTTCTTCTTTCTTGTTAGAACAAGTTAGGGAAGACGAGACTTCGTCTTCTTCCTCTTTGAATTAA 855 0.4784 MGKKMKFPSLLHKNSHPTTTTTTVKPSSTSWPWPSCHQPRTLSFRAQNDVAFKTINPAYLDTPESSHSFFTVSPDSGSFSTASEEDSRRPDSLETLIRPLRSDRLFFHLDQTSSILESKAGTSTPTPTETTTTPTPTEKPTTTTTKLPFRDSVVMSVESQDPYVDFLRSMEEMVEAQCVKDWEGLQELLCWYLKVNGKNNHSYIVGAFIDLLVTFSSTPSSSNINSHSPSSPLSFYSSSLSSSCSTRCVSCLEAEDEVDIATPSSSFLLEQVREDETSSSSSLN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00686 284 MobiDBLite consensus disorder prediction 117 145 - -
Lapu6g00686 284 MobiDBLite consensus disorder prediction 71 91 - -
Lapu6g00686 284 MobiDBLite consensus disorder prediction 1 32 - -
Lapu6g00686 284 NCBIfam uncharacterized plant-specific domain TIGR01568 153 215 IPR006458 -
Lapu6g00686 284 MobiDBLite consensus disorder prediction 12 32 - -
Lapu6g00686 284 Pfam Transcriptional repressor, ovate 159 214 IPR006458 -
Lapu6g00686 284 ProSiteProfiles OVATE domain profile. 153 214 IPR006458 -
Lapu6g00686 284 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 216 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00686 Lapu-Chr6 7167865 7170144 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu6g00686 Ovate 7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00686 - - vun:114179778 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00686 6 7167865 7170144 Lapu7g02451 7 40943418 40944146 ECH
Lapu6g00686 6 7167865 7170144 Lapu6g00686 6 7167865 7170144 ECH