Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00654 ATGGATATGTCAAATCCTGCTGCCTTTGTCAATGCAGAACTATTGCACTTTTATGTTGGAAGGAGAGTACGGGCCCTGATGCAGGTTGTGCGATCTGATGGTGGAGTTGTCATTGGAAAATCAACCGATGAGAAACAGCTAGTTGTAAAAGGATCACCCCCTGCTCCTCTTACAACTTTTGTAGAAGTATTTGGTATTGTTAACAGTGACAAGTCAATTGCTGCTGAGATATGGACCAATTTTGGTGATTCCATTGGTATTATATATTCAGCTACAATAAGCTGTGTCAGCTTGCAAATGGAGAACTTAAATACCTCTTCCTGTGAGTTATAA 333 0.4024 MDMSNPAAFVNAELLHFYVGRRVRALMQVVRSDGGVVIGKSTDEKQLVVKGSPPAPLTTFVEVFGIVNSDKSIAAEIWTNFGDSIGIIYSATISCVSLQMENLNTSSCEL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00654 110 SUPERFAMILY Nucleic acid-binding proteins 3 83 IPR012340 -
Lapu6g00654 110 Gene3D - 3 104 IPR012340 -
Lapu6g00654 110 Pfam Replication factor A protein 3 3 85 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lapu6g00654 110 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00654 Lapu-Chr6 6843091 6845275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00654 1 87 Core DNA Replication Machinery Family AT4G18590 63.218 5.82e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00654 K10740 - gmx:100306641 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00654 6 6843091 6845275 Lapu6g00654 6 6843091 6845275 ECH
Lapu6g00654 6 6843091 6845275 Lapu7g00685 7 7974133 7988347 PCT